RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 FLOT1O75955 427 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 KIF4AO95239 1232 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 HOXD13P35453 343 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 STAT3P40763 770 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 NPEPPSP55786 919 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 LMBR1Q8WVP7 490 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 LENG9Q96B70 501 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 KRT12Q99456 494 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 PACSIN1Q9BY11 444 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 ZNF277Q9NRM2 450 aaPredicted RBP21.74■■□□□ 1.07
SOX2-201ENST00000325404 NAGPAQ9UK23 515 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 ZEB2O60315 1214 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 HSPA9P38646 679 aaKnown RBP21.73■■□□□ 1.07
SOX2-201ENST00000325404 GNGT1P63211 74 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 MRPS25P82663 173 aaKnown RBP21.73■■□□□ 1.07
SOX2-201ENST00000325404 CACNB1Q02641 598 aaPredicted RBP21.73■■□□□ 1.07
SOX2-201ENST00000325404 CUL1Q13616 776 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 KDM7AQ6ZMT4 941 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 CASKIN2Q8WXE0 1202 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 REEP2Q9BRK0 252 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 ISCUQ9H1K1 167 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 SHTN1A0MZ66 631 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 EBAG9O00559 213 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 EEF2P13639 858 aaKnown RBP21.73■■□□□ 1.07
SOX2-201ENST00000325404 CASP5P51878 434 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 JAM2P57087 298 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 ARID5AQ03989 594 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 VPS36Q86VN1 386 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 SFR1Q86XK3 245 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 PI4KBQ9UBF8 816 aa21.73■■□□□ 1.07
SOX2-201ENST00000325404 SRRM3A6NNA2 597 aaPredicted RBP21.72■■□□□ 1.07
SOX2-201ENST00000325404 CPP00450 1065 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 GAP43P17677 238 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 SLC9A1P19634 815 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 RSBN1LQ6PCB5 846 aaPredicted RBP21.72■■□□□ 1.07
SOX2-201ENST00000325404 SLFN11Q7Z7L1 901 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 GMCL1P1Q8NEA9 526 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 CCDC43Q96MW1 224 aaKnown RBP21.72■■□□□ 1.07
SOX2-201ENST00000325404 VPS33BQ9H267 617 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 DNAJC18Q9H819 358 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 OLFML3Q9NRN5 406 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 A0A087WUV0 522 aaPredicted RBP21.72■■□□□ 1.07
SOX2-201ENST00000325404 CYP3A4P08684 503 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 POLD1P28340 1107 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 TGFB2P61812 414 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 PRR16Q569H4 304 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 ALKBH5Q6P6C2 394 aaKnown RBP21.72■■□□□ 1.07
SOX2-201ENST00000325404 LRIG3Q6UXM1 1119 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 PIK3R5Q8WYR1 880 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 GMCL1Q96IK5 515 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 TAF1DQ9H5J8 278 aaPredicted RBP21.72■■□□□ 1.07
SOX2-201ENST00000325404 TDRD3Q9H7E2 651 aaKnown RBP21.72■■□□□ 1.07
SOX2-201ENST00000325404 PIM2Q9P1W9 311 aa21.72■■□□□ 1.07
SOX2-201ENST00000325404 ATXN2Q99700 1313 aaKnown RBP21.71■■□□□ 1.07
SOX2-201ENST00000325404 DDTLA6NHG4 134 aaPredicted RBP21.71■■□□□ 1.07
SOX2-201ENST00000325404 ZBTB48P10074 688 aaPredicted RBP21.71■■□□□ 1.07
SOX2-201ENST00000325404 IFT81Q8WYA0 676 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 ZHX3Q9H4I2 956 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 DAAM1Q9Y4D1 1078 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 ZNF233A6NK53 670 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 CCDC188H7C350 402 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 RAD17O75943 681 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 EYA4O95677 639 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 FAM153BP0C7A2 387 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 PSMC6P62333 389 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 FAM153CQ494X1 144 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 TATDN1Q6P1N9 297 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 BCAS4Q8TDM0 211 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 FAM153AQ9UHL3 310 aa21.71■■□□□ 1.07
SOX2-201ENST00000325404 EIF3DO15371 548 aaKnown RBP eCLIP21.7■■□□□ 1.06
SOX2-201ENST00000325404 RAD51CO43502 376 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 AKAP3O75969 853 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 NR3C1P04150 777 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 ACTN1P12814 892 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 PABPC4Q13310 644 aaKnown RBP eCLIP21.7■■□□□ 1.06
SOX2-201ENST00000325404 CERKLQ49MI3 558 aaPredicted RBP21.7■■□□□ 1.06
SOX2-201ENST00000325404 SPATS2Q86XZ4 545 aaKnown RBP21.7■■□□□ 1.06
SOX2-201ENST00000325404 SYCE1Q8N0S2 351 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 SIX2Q9NPC8 291 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 SUCLA2Q9P2R7 463 aaPredicted RBP21.7■■□□□ 1.06
SOX2-201ENST00000325404 VAV3Q9UKW4 847 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 SPDYE3A6NKU9 549 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 HMGB1P1B2RPK0 211 aaPredicted RBP21.7■■□□□ 1.06
SOX2-201ENST00000325404 KCNK3O14649 394 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 VIL1P09327 827 aaKnown RBP21.7■■□□□ 1.06
SOX2-201ENST00000325404 FERP16591 822 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 SH3BP5LQ7L8J4 393 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 FBXO11Q86XK2 927 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 RASGEF1CQ8N431 466 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 TPCN2Q8NHX9 752 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 SLC35C1Q96A29 364 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 PRMT6Q96LA8 375 aaPredicted RBP21.7■■□□□ 1.06
SOX2-201ENST00000325404 EFCC1Q9HA90 598 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 ASTN1O14525 1302 aa21.7■■□□□ 1.06
SOX2-201ENST00000325404 ENTPD3O75355 529 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 TMEM179Q6ZVK1 233 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 FMNL3Q8IVF7 1028 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 RBM46Q8TBY0 533 aaKnown RBP21.69■■□□□ 1.06
SOX2-201ENST00000325404 BORCS6Q96GS4 357 aa21.69■■□□□ 1.06
SOX2-201ENST00000325404 P2RX7Q99572 595 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms