RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ADRM1Q16186 407 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 KLHL7Q8IXQ5 586 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 WDR11Q9BZH6 1224 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 PANK4Q9NVE7 773 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 CCNL1Q9UK58 526 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 PGRMC1O00264 195 aaKnown RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 CYTH3O43739 400 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 SLC9A5Q14940 896 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 GSTA4O15217 222 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 DNAJC6O75061 913 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 ANXA1P04083 346 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 DAB2IPQ5VWQ8 1189 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 EMBQ6PCB8 327 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 STK32BQ9NY57 414 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 EHD2Q9NZN4 543 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 ADD3Q9UEY8 706 aaKnown RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 CDC23Q9UJX2 597 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 SLFN14P0C7P3 912 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 SLC9A1P19634 815 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 SERPINB3P29508 390 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 TMEM245Q9H330 911 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 TAB2Q9NYJ8 693 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 ANKARQ7Z5J8 1434 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 BFSP1Q12934 665 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 RASGRF1Q13972 1273 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 ZNF280DQ6N043 979 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 SLF1Q9BQI6 1058 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 ARMT1Q9H993 441 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 PDE11AQ9HCR9 933 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 CSADQ9Y600 493 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 HECW2Q9P2P5 1572 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 SERPINB8P50452 374 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 TTC39CQ8N584 583 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 NR1H4Q96RI1 486 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 MXD3Q9BW11 206 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 NCAPD2Q15021 1401 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 ORC4O43929 436 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 RPN1P04843 607 aaKnown RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 MFN1Q8IWA4 741 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 FANCBQ8NB91 859 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 LIMA1Q9UHB6 759 aaKnown RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 HEXIM1O94992 359 aaKnown RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 LRRC63Q05C16 580 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 STAMQ92783 540 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 CCDC87Q9NVE4 849 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 ZNF263O14978 683 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 DDX5P17844 614 aaKnown RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 RSRC2Q7L4I2 434 aaKnown RBP10.39□□□□□ -0.75
COL12A1-201ENST00000322507 SSH3Q8TE77 659 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 MTRQ99707 1265 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 TUFT1Q9NNX1 390 aa10.39□□□□□ -0.75
COL12A1-201ENST00000322507 H3BRJ5 948 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PFKFB1P16118 471 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 EXOC3L4Q17RC7 722 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 ARL6IP4Q66PJ3 421 aaKnown RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 KIAA0825Q8IV33 1275 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 TRIM59Q8IWR1 403 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 NRBP2Q9NSY0 501 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 DDHD2O94830 711 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 INTS13Q9NVM9 706 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PITPNM2Q9BZ72 1349 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 C16orf96A6NNT2 1141 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 POLR2EP19388 210 aaKnown RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 KLC4Q9NSK0 619 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 EFCAB6Q5THR3 1501 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 ENO4A6NNW6 628 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 NEURL1BA8MQ27 555 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 IL12RB1P42701 662 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 EIF2B2P49770 351 aaKnown RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 GLG1Q92896 1179 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 TRIM31Q9BZY9 425 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 KRT19P08727 400 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PATL1Q86TB9 770 aaKnown RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PANX2Q96RD6 677 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 SUCLA2Q9P2R7 463 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 SYNGAP1Q96PV0 1343 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 SUZ12Q15022 739 aaKnown RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PCGF5Q86SE9 256 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 KRT84Q9NSB2 600 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-201ENST00000322507 K7ENM7 598 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 IFNA8P32881 189 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 BCAP31P51572 246 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 RCAN1P53805 252 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 CCNA1P78396 465 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PPME1Q9Y570 386 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 NXNQ6DKJ4 435 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 TPH2Q8IWU9 490 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 USTQ9Y2C2 406 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 SLC4A7Q9Y6M7 1214 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 SAMD9LQ8IVG5 1584 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 QRICH2Q9H0J4 1663 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 RXRAP19793 462 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 TERF2Q15554 542 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 PODXLO00592 558 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 IFNB1P01574 187 aa10.38□□□□□ -0.75
COL12A1-201ENST00000322507 ACAP2Q15057 778 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms