RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 NPEPPSP55786 919 aa18.62■□□□□ 0.57
LRRC42-201ENST00000319223 MGAT3Q09327 533 aa18.62■□□□□ 0.57
LRRC42-201ENST00000319223 FAM26DQ5JW98 314 aa18.62■□□□□ 0.57
LRRC42-201ENST00000319223 OTOP2Q7RTS6 562 aa18.62■□□□□ 0.57
LRRC42-201ENST00000319223 KIAA0319LQ8IZA0 1049 aa18.62■□□□□ 0.57
LRRC42-201ENST00000319223 FTOQ9C0B1 505 aaKnown RBP eCLIP18.62■□□□□ 0.57
LRRC42-201ENST00000319223 SMIM35A0A1B0GVV1 85 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 A0A1W2PPC1 479 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 FGBP02675 491 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 SPATA31C1P0DKV0 1188 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 RFC2P35250 354 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 FXR2P51116 673 aaKnown RBP eCLIP18.61■□□□□ 0.57
LRRC42-201ENST00000319223 ATP2C1P98194 919 aaPredicted RBP18.61■□□□□ 0.57
LRRC42-201ENST00000319223 PKP1Q13835 747 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 C4orf19Q8IY42 314 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 RPUSD2Q8IZ73 545 aaKnown RBP18.61■□□□□ 0.57
LRRC42-201ENST00000319223 ZSWIM4Q9H7M6 989 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 CXXC1Q9P0U4 656 aaPredicted RBP18.61■□□□□ 0.57
LRRC42-201ENST00000319223 CEP131Q9UPN4 1083 aa18.61■□□□□ 0.57
LRRC42-201ENST00000319223 CAND2O75155 1236 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 MED24O75448 989 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 CXCL10P02778 98 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 FOXD4L5Q5VV16 416 aaPredicted RBP18.6■□□□□ 0.57
LRRC42-201ENST00000319223 LRRC71Q8N4P6 559 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 METTL13Q8N6R0 699 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 LINC01465Q8N7H1 131 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 FOXD4L4Q8WXT5 416 aaPredicted RBP18.6■□□□□ 0.57
LRRC42-201ENST00000319223 CDY2AQ9Y6F7 541 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 EVPLQ92817 2033 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
LRRC42-201ENST00000319223 CLCN3P51790 818 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 EFCAB12Q6NXP0 572 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 PSRC1Q6PGN9 363 aaPredicted RBP18.6■□□□□ 0.57
LRRC42-201ENST00000319223 CATSPER3Q86XQ3 398 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 RNPC3Q96LT9 517 aaKnown RBP18.6■□□□□ 0.57
LRRC42-201ENST00000319223 CDHR5Q9HBB8 845 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 CLIC4Q9Y696 253 aa18.6■□□□□ 0.57
LRRC42-201ENST00000319223 SIP14410 1827 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 LAMA2P24043 3122 aaKnown RBP18.59■□□□□ 0.57
LRRC42-201ENST00000319223 PP2D1A8MPX8 630 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 CDC25AP30304 524 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 YWHABP31946 246 aaKnown RBP18.59■□□□□ 0.57
LRRC42-201ENST00000319223 PRPHP41219 470 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 MRPS6P82932 125 aaKnown RBP18.59■□□□□ 0.57
LRRC42-201ENST00000319223 MKRN4PQ13434 485 aaPredicted RBP18.59■□□□□ 0.57
LRRC42-201ENST00000319223 DRP2Q13474 957 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
LRRC42-201ENST00000319223 RASIP1Q5U651 963 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 RSPH3Q86UC2 560 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 IGSF22Q8N9C0 903 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 HERVK_113Q902F9 699 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 PPP1R16BQ96T49 567 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 SUGCTQ9HAC7 445 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 CYP26B1Q9NR63 512 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 LAMA3Q16787 3333 aa18.59■□□□□ 0.57
LRRC42-201ENST00000319223 LAD1O00515 517 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 MAGEB2O15479 319 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 DKC1O60832 514 aaKnown RBP eCLIP18.58■□□□□ 0.57
LRRC42-201ENST00000319223 VTNP04004 478 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 PFKMP08237 780 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 ECM1Q16610 540 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 TMEM266Q2M3C6 531 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 FAM109BQ6ICB4 259 aaPredicted RBP18.58■□□□□ 0.57
LRRC42-201ENST00000319223 DTHD1Q6ZMT9 781 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 NEK9Q8TD19 979 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 PIGOQ8TEQ8 1089 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 LRWD1Q9UFC0 647 aa18.58■□□□□ 0.57
LRRC42-201ENST00000319223 LYPLA2O95372 231 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 PARNO95453 639 aaKnown RBP18.57■□□□□ 0.56
LRRC42-201ENST00000319223 GHRP10912 638 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 PDIA5Q14554 519 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 DBF4BQ8NFT6 615 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 CEP170P1Q96L14 293 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 POLR3CQ9BUI4 534 aaPredicted RBP18.57■□□□□ 0.56
LRRC42-201ENST00000319223 TUFT1Q9NNX1 390 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 IGKV6-21A0A0C4DH24 114 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 GRIN1Q05586 938 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 LPIN1Q14693 890 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 LRIT3Q3SXY7 679 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 PLEKHG4Q58EX7 1191 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 IER5Q5VY09 327 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 POTEGQ6S5H5 508 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 NME8Q8N427 588 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 ZNF668Q96K58 619 aaPredicted RBP18.57■□□□□ 0.56
LRRC42-201ENST00000319223 CELF4Q9BZC1 486 aaKnown RBP18.57■□□□□ 0.56
LRRC42-201ENST00000319223 ZSCAN16Q9H4T2 348 aaPredicted RBP18.57■□□□□ 0.56
LRRC42-201ENST00000319223 BMP2KQ9NSY1 1161 aaPredicted RBP18.57■□□□□ 0.56
LRRC42-201ENST00000319223 TRPV2Q9Y5S1 764 aa18.57■□□□□ 0.56
LRRC42-201ENST00000319223 VWA3AA6NCI4 1184 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 GRXCR1A8MXD5 290 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 MAFO75444 373 aaPredicted RBP18.56■□□□□ 0.56
LRRC42-201ENST00000319223 RPA1P27694 616 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 CEBPZQ03701 1054 aaKnown RBP18.56■□□□□ 0.56
LRRC42-201ENST00000319223 PTPAQ15257 358 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 XKR9Q5GH70 373 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 FBXO47Q5MNV8 452 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 CNKSR3Q6P9H4 555 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 USP28Q96RU2 1077 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms