RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PCDHA12Q9UN75 941 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 PFDN1O60925 122 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 CAND2O75155 1236 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 DPEP1P16444 411 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 AARSP49588 968 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDHR3-201ENST00000317716 RASSF2P50749 326 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 SCNN1DP51172 638 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 KDM7AQ6ZMT4 941 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 DPH6Q7L8W6 267 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 CREG2Q8IUH2 290 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 RPUSD2Q8IZ73 545 aaKnown RBP8.15□□□□□ -1.1
CDHR3-201ENST00000317716 SYCE1Q8N0S2 351 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 NKX2-3Q8TAU0 364 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 PIK3R5Q8WYR1 880 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 SLC4A7Q9Y6M7 1214 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 COL18A1P39060 1754 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 ITIH6Q6UXX5 1313 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 A0A087X0T9 212 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 NPHP3-ACAD11A0A0J9YXS1 232 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 ARHGAP42A6NI28 874 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 CCT8L1PA6NM43 557 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 CIAO1O76071 339 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 FAM228BP0C875 321 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 SLC16A2P36021 539 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 PRPHP41219 470 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 PDE1CQ14123 709 aaPredicted RBP8.15□□□□□ -1.11
CDHR3-201ENST00000317716 QPCTQ16769 361 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 GLYCTKQ8IVS8 523 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 LARGE2Q8N3Y3 721 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 PDCD7Q8N8D1 485 aaKnown RBP8.15□□□□□ -1.11
CDHR3-201ENST00000317716 TTC16Q8NEE8 873 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 AENQ8WTP8 325 aaKnown RBP8.15□□□□□ -1.11
CDHR3-201ENST00000317716 RBM17Q96I25 401 aaKnown RBP8.15□□□□□ -1.11
CDHR3-201ENST00000317716 PIGSQ96S52 555 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 LEMD3Q9Y2U8 911 aa8.15□□□□□ -1.11
CDHR3-201ENST00000317716 ERVV-1B6SEH8 477 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 EPHB6O15197 1021 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 RAD17O75943 681 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 UBOX5O94941 541 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 MDM2Q00987 491 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 AMPD2Q01433 879 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 LRRC36Q1X8D7 754 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 CEP63Q96MT8 703 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 NUDCD1Q96RS6 583 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PLVAPQ9BX97 442 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 AGXT2Q9BYV1 514 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF277Q9NRM2 450 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 FAM217BQ9NTX9 383 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 GCNT4Q9P109 453 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 HDAC9Q9UKV0 1011 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 MARF1Q9Y4F3 1742 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 A0A1W2PQC6 194 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 E9PMD0 336 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 ATP2A2P16615 1042 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 ADCY7P51828 1080 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PMS2P54278 862 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 GTF2IP78347 998 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 BIRC3Q13489 604 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 CUL1Q13616 776 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 RABL6Q3YEC7 729 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 THEMIS2Q5TEJ8 643 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 FYB2Q5VWT5 728 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 WDR59Q6PJI9 974 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 TRPM8Q7Z2W7 1104 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 ERMNQ8TAM6 284 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 CCDC127Q96BQ5 260 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 RAB3IPQ96QF0 476 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 ISCA1Q9BUE6 129 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 HEMGNQ9BXL5 484 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PITPNM3Q9BZ71 974 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 TRIM9Q9C026 710 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 DLGAP2Q9P1A6 1054 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 A0A0G2JND7 137 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PPIP5K2O43314 1243 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 LUC7L3O95232 432 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 HARSP12081 509 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 BRAFP15056 766 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 RPL13P26373 211 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PPP1R2P41236 205 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 SARSP49591 514 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PDE6CP51160 858 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 SLC29A2Q14542 456 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 GLE1Q53GS7 698 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PRR16Q569H4 304 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 ANKRD20A8PQ5CZ79 823 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 RC3H1Q5TC82 1133 aaKnown RBP8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PDXDC1Q6P996 788 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 CCDC62Q6P9F0 684 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 GJB7Q6PEY0 223 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 ISLR2Q6UXK2 745 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 TPH2Q8IWU9 490 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 PPM1KQ8N3J5 372 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 LRRC8CQ8TDW0 803 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 RILPQ96NA2 401 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 FRMD4BQ9Y2L6 1034 aa8.14□□□□□ -1.11
CDHR3-201ENST00000317716 CNTNAP4Q9C0A0 1308 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 STK36Q9NRP7 1315 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 PPP1R12AO14974 1030 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 RPS6KA5O75582 802 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms