RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 EFHD1Q9BUP0 239 aa8.83□□□□□ -1
VPS41-202ENST00000310301 GLIS2Q9BZE0 524 aaPredicted RBP8.83□□□□□ -1
VPS41-202ENST00000310301 DAGLAQ9Y4D2 1042 aa8.83□□□□□ -1
VPS41-202ENST00000310301 PCDHA1Q9Y5I3 950 aa8.83□□□□□ -1
VPS41-202ENST00000310301 ORC6Q9Y5N6 252 aa8.83□□□□□ -1
VPS41-202ENST00000310301 UTYO14607 1347 aa8.83□□□□□ -1
VPS41-202ENST00000310301 ESYT2A0FGR8 921 aa8.82□□□□□ -1
VPS41-202ENST00000310301 HMGB1P1B2RPK0 211 aaPredicted RBP8.82□□□□□ -1
VPS41-202ENST00000310301 H0Y3Z8 333 aa8.82□□□□□ -1
VPS41-202ENST00000310301 GSPT1P15170 499 aaKnown RBP8.82□□□□□ -1
VPS41-202ENST00000310301 CYP2J2P51589 502 aa8.82□□□□□ -1
VPS41-202ENST00000310301 PDCLQ13371 301 aa8.82□□□□□ -1
VPS41-202ENST00000310301 SEPT2Q15019 361 aa8.82□□□□□ -1
VPS41-202ENST00000310301 HDAC11Q96DB2 347 aa8.82□□□□□ -1
VPS41-202ENST00000310301 RTEL1Q9NZ71 1219 aa8.82□□□□□ -1
VPS41-202ENST00000310301 SCHIP1Q9P0W5 487 aaPredicted RBP8.82□□□□□ -1
VPS41-202ENST00000310301 TBK1Q9UHD2 729 aa8.82□□□□□ -1
VPS41-202ENST00000310301 NDUFB9Q9Y6M9 179 aa8.82□□□□□ -1
VPS41-202ENST00000310301 CCDC85CA6NKD9 419 aa8.82□□□□□ -1
VPS41-202ENST00000310301 H0YCG3 227 aa8.82□□□□□ -1
VPS41-202ENST00000310301 MAPK4P31152 587 aa8.82□□□□□ -1
VPS41-202ENST00000310301 STAT3P40763 770 aa8.82□□□□□ -1
VPS41-202ENST00000310301 SNX1Q13596 522 aa8.82□□□□□ -1
VPS41-202ENST00000310301 NOSTRINQ8IVI9 506 aa8.82□□□□□ -1
VPS41-202ENST00000310301 TRIM42Q8IWZ5 723 aa8.82□□□□□ -1
VPS41-202ENST00000310301 CEP19Q96LK0 163 aa8.82□□□□□ -1
VPS41-202ENST00000310301 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.82□□□□□ -1
VPS41-202ENST00000310301 MAD1L1Q9Y6D9 718 aa8.82□□□□□ -1
VPS41-202ENST00000310301 GOLGA8QA0A0J9YX86 632 aa8.82□□□□□ -1
VPS41-202ENST00000310301 GOLGA8OA6NCC3 632 aa8.82□□□□□ -1
VPS41-202ENST00000310301 GOLGA8NF8WBI6 632 aa8.82□□□□□ -1
VPS41-202ENST00000310301 MAPK13O15264 365 aa8.82□□□□□ -1
VPS41-202ENST00000310301 MAN1A2O60476 641 aa8.82□□□□□ -1
VPS41-202ENST00000310301 MOCS3O95396 460 aa8.82□□□□□ -1
VPS41-202ENST00000310301 HMGCS2P54868 508 aa8.82□□□□□ -1
VPS41-202ENST00000310301 LMNB2Q03252 620 aa8.82□□□□□ -1
VPS41-202ENST00000310301 KCNV1Q6PIU1 500 aa8.82□□□□□ -1
VPS41-202ENST00000310301 FAM83AQ86UY5 434 aa8.82□□□□□ -1
VPS41-202ENST00000310301 ZBTB8OSQ8IWT0 167 aa8.82□□□□□ -1
VPS41-202ENST00000310301 SH3RF3Q8TEJ3 882 aaPredicted RBP8.82□□□□□ -1
VPS41-202ENST00000310301 XRN1Q8IZH2 1706 aaKnown RBP8.82□□□□□ -1
VPS41-202ENST00000310301 KRT19P08727 400 aa8.82□□□□□ -1
VPS41-202ENST00000310301 CTCFP49711 727 aaPredicted RBP8.82□□□□□ -1
VPS41-202ENST00000310301 NBPF9Q3BBW0 867 aa8.82□□□□□ -1
VPS41-202ENST00000310301 CAPRIN2Q6IMN6 1127 aaKnown RBP8.82□□□□□ -1
VPS41-202ENST00000310301 NSMCE1Q8WV22 266 aa8.82□□□□□ -1
VPS41-202ENST00000310301 PIK3R5Q8WYR1 880 aa8.82□□□□□ -1
VPS41-202ENST00000310301 ACAD9Q9H845 621 aa8.82□□□□□ -1
VPS41-202ENST00000310301 PALMDQ9NP74 551 aa8.82□□□□□ -1
VPS41-202ENST00000310301 KRT82Q9NSB4 513 aa8.82□□□□□ -1
VPS41-202ENST00000310301 ZNF711Q9Y462 761 aa8.82□□□□□ -1
VPS41-202ENST00000310301 CHD2O14647 1828 aaKnown RBP8.82□□□□□ -1
VPS41-202ENST00000310301 GAS7O60861 476 aa8.82□□□□□ -1
VPS41-202ENST00000310301 HNRNPCP07910 306 aaKnown RBP eCLIP8.82□□□□□ -1
VPS41-202ENST00000310301 TTLL4Q14679 1199 aa8.82□□□□□ -1
VPS41-202ENST00000310301 HADHQ16836 314 aaKnown RBP8.82□□□□□ -1
VPS41-202ENST00000310301 KNDC1Q76NI1 1749 aa8.82□□□□□ -1
VPS41-202ENST00000310301 PARP9Q8IXQ6 854 aa8.82□□□□□ -1
VPS41-202ENST00000310301 NLGN2Q8NFZ4 835 aa8.82□□□□□ -1
VPS41-202ENST00000310301 CDCA5Q96FF9 252 aa8.82□□□□□ -1
VPS41-202ENST00000310301 ADPGKQ9BRR6 497 aa8.82□□□□□ -1
VPS41-202ENST00000310301 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
VPS41-202ENST00000310301 SPAG7O75391 227 aa8.81□□□□□ -1
VPS41-202ENST00000310301 STAM2O75886 525 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ACTN1P12814 892 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ZSCAN20P17040 1043 aaPredicted RBP8.81□□□□□ -1
VPS41-202ENST00000310301 TFDP1Q14186 410 aa8.81□□□□□ -1
VPS41-202ENST00000310301 DPCR1Q3MIW9 517 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SCYL2Q6P3W7 929 aa8.81□□□□□ -1
VPS41-202ENST00000310301 DCLK2Q8N568 766 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ZNF274Q96GC6 653 aaPredicted RBP8.81□□□□□ -1
VPS41-202ENST00000310301 PRDM5Q9NQX1 630 aaPredicted RBP8.81□□□□□ -1
VPS41-202ENST00000310301 SEPT10Q9P0V9 454 aa8.81□□□□□ -1
VPS41-202ENST00000310301 WDR91A4D1P6 747 aa8.81□□□□□ -1
VPS41-202ENST00000310301 CHGBP05060 677 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ZFXP17010 805 aaPredicted RBP8.81□□□□□ -1
VPS41-202ENST00000310301 FOXO4P98177 505 aa8.81□□□□□ -1
VPS41-202ENST00000310301 RABL6Q3YEC7 729 aaPredicted RBP8.81□□□□□ -1
VPS41-202ENST00000310301 RNF180Q86T96 592 aa8.81□□□□□ -1
VPS41-202ENST00000310301 TRIM56Q9BRZ2 755 aaKnown RBP8.81□□□□□ -1
VPS41-202ENST00000310301 TRIM17Q9Y577 477 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SLIT3O75094 1523 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SPDYE2BA6NHP3 402 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SYF2O95926 243 aaKnown RBP8.81□□□□□ -1
VPS41-202ENST00000310301 MYL3P08590 195 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SPDYE6P0CI01 402 aa8.81□□□□□ -1
VPS41-202ENST00000310301 TNNI1P19237 187 aa8.81□□□□□ -1
VPS41-202ENST00000310301 KCNJ6P48051 423 aa8.81□□□□□ -1
VPS41-202ENST00000310301 PDE6CP51160 858 aa8.81□□□□□ -1
VPS41-202ENST00000310301 PTH1RQ03431 593 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SNRNP48Q6IEG0 339 aaKnown RBP8.81□□□□□ -1
VPS41-202ENST00000310301 CYP4F22Q6NT55 531 aa8.81□□□□□ -1
VPS41-202ENST00000310301 FBXO33Q7Z6M2 555 aa8.81□□□□□ -1
VPS41-202ENST00000310301 GPBP1Q86WP2 473 aa8.81□□□□□ -1
VPS41-202ENST00000310301 USP6NLQ92738 828 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ATP6V0A1Q93050 837 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SMYD2Q9NRG4 433 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ARMCX3Q9UH62 379 aaPredicted RBP8.81□□□□□ -1
VPS41-202ENST00000310301 LTBP4Q8N2S1 1624 aa8.81□□□□□ -1
VPS41-202ENST00000310301 PGRMC1O00264 195 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms