RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PPP1R18Q6NYC8 613 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 UNC13DQ70J99 1090 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 AMACRQ9UHK6 382 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 FAM153AQ9UHL3 310 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 SRGNP10124 158 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 VSIG1Q86XK7 387 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 AMNQ9BXJ7 453 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 TMEM39BQ9GZU3 492 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 TBK1Q9UHD2 729 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 CAPN11Q9UMQ6 739 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 TISP43B9A030 160 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 EIF2AK2P19525 551 aaKnown RBP13.77□□□□□ -0.21
RETREG3-201ENST00000309428 KCNH2Q12809 1159 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 ZNF211Q13398 564 aaPredicted RBP13.77□□□□□ -0.21
RETREG3-201ENST00000309428 COG2Q14746 738 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 ALS2CLQ60I27 953 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 RETREG2Q8NC44 543 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 ERMNQ8TAM6 284 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 PURBQ96QR8 312 aaKnown RBP13.77□□□□□ -0.21
RETREG3-201ENST00000309428 MTA3Q9BTC8 594 aa13.77□□□□□ -0.21
RETREG3-201ENST00000309428 GLIS2Q9BZE0 524 aaPredicted RBP13.77□□□□□ -0.21
RETREG3-201ENST00000309428 ABCB11O95342 1321 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
RETREG3-201ENST00000309428 DAPK3O43293 454 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 EXOC3O60645 756 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
RETREG3-201ENST00000309428 DENND2CQ68D51 928 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 COA1Q9GZY4 146 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 NSRP1Q9H0G5 558 aaKnown RBP13.76□□□□□ -0.21
RETREG3-201ENST00000309428 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 BMP3P12645 472 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 XRCC5P13010 732 aaKnown RBP13.76□□□□□ -0.21
RETREG3-201ENST00000309428 RC3H1Q5TC82 1133 aaKnown RBP13.76□□□□□ -0.21
RETREG3-201ENST00000309428 CCDC105Q8IYK2 499 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 TAB3Q8N5C8 712 aaPredicted RBP13.76□□□□□ -0.21
RETREG3-201ENST00000309428 TAOK3Q9H2K8 898 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 KCND1Q9NSA2 647 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 INTS9Q9NV88 658 aaKnown RBP13.76□□□□□ -0.21
RETREG3-201ENST00000309428 MYH10P35580 1976 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 PSMD14O00487 310 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 ZNF263O14978 683 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 PPP4CP60510 307 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 DLGAP5Q15398 846 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 ODR4Q5SWX8 454 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 GDAP1Q8TB36 358 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 DYDC2Q96IM9 177 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 AK8Q96MA6 479 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 REEP2Q9BRK0 252 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 ADAM33Q9BZ11 813 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 CTTNBP2NLQ9P2B4 639 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 HDAC9Q9UKV0 1011 aa13.76□□□□□ -0.21
RETREG3-201ENST00000309428 POLRMTO00411 1230 aaKnown RBP13.75□□□□□ -0.21
RETREG3-201ENST00000309428 GLI1P08151 1106 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 TRADDQ15628 312 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 NBPF9Q3BBW0 867 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 CATSPER3Q86XQ3 398 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 HAS1Q92839 578 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 PI4KBQ9UBF8 816 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 FBXL5Q9UKA1 691 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 SNX24Q9Y343 169 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 RABGAP1Q9Y3P9 1069 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 LACTBP83111 547 aaPredicted RBP13.75□□□□□ -0.21
RETREG3-201ENST00000309428 APOBEC3HQ6NTF7 200 aaKnown RBP13.75□□□□□ -0.21
RETREG3-201ENST00000309428 CCDC197Q8NCU1 140 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 HOOK2Q96ED9 719 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 MTMR8Q96EF0 704 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 VIPAS39Q9H9C1 493 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 ASIC3Q9UHC3 531 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 CICQ96RK0 1608 aaPredicted RBP13.75□□□□□ -0.21
RETREG3-201ENST00000309428 A0A087X0T9 212 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 GMNCA6NCL1 334 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 ENO4A6NNW6 628 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 H0Y3Z8 333 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 SPOPO43791 374 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 FAM228BP0C875 321 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 KLRC1P26715 233 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 KAT2BQ92831 832 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
RETREG3-201ENST00000309428 CALCAP01258 141 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 EXOC3L4Q17RC7 722 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 C2CD6Q53TS8 623 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 ATP6V1G3Q96LB4 118 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 YIPF3Q9GZM5 350 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 ACP6Q9NPH0 428 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 FAM53CQ9NYF3 392 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 GCNT4Q9P109 453 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 SALL4Q9UJQ4 1053 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 PDS5AQ29RF7 1337 aaKnown RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 LRP6O75581 1613 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 ITGB4P16144 1822 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 A6NNZ2 444 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 FAM86B1E9PN63 330 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 FAM86B2P0C5J1 330 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 TUBB8Q3ZCM7 444 aa13.74□□□□□ -0.21
RETREG3-201ENST00000309428 GPATCH4Q5T3I0 446 aaKnown RBP13.74□□□□□ -0.21
RETREG3-201ENST00000309428 SYDE2Q5VT97 1194 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms