RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 ICA1LQ8NDH6 482 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 AP1M1Q9BXS5 423 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 PTPN21Q16825 1174 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 COBLL1Q53SF7 1204 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 FBXO31Q5XUX0 539 aaPredicted RBP15.22■□□□□ 0.03
HIPK3-201ENST00000303296 SLC13A1Q9BZW2 595 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 ACTR5Q9H9F9 607 aaPredicted RBP15.22■□□□□ 0.03
HIPK3-201ENST00000303296 C6orf118Q5T5N4 469 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 VN1R5Q7Z5H4 357 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 MID2Q9UJV3 735 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 KCNA2P16389 499 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 CCHCR1Q8TD31 782 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 CEP170P1Q96L14 293 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 TRIM33Q9UPN9 1127 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 SEC31AO94979 1220 aaKnown RBP15.22■□□□□ 0.03
HIPK3-201ENST00000303296 CCNA1P78396 465 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 MDM2Q00987 491 aaPredicted RBP15.22■□□□□ 0.03
HIPK3-201ENST00000303296 IYDQ6PHW0 289 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 BTBD6Q96KE9 485 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 RERGLQ9H628 205 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 SOX13Q9UN79 622 aa15.22■□□□□ 0.03
HIPK3-201ENST00000303296 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 OR52Z1P0C646 297 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 PSMC2P35998 433 aaKnown RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 NCALDP61601 193 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 RASSF3Q86WH2 238 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 MEFVO15553 781 aaPredicted RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 GTPBP6O43824 516 aaPredicted RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 FTCDO95954 541 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 ERFP50548 548 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 AP1B1Q10567 949 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 ZNF394Q53GI3 561 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 MEI1Q5TIA1 1274 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 NUP93Q8N1F7 819 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 MAGEB10Q96LZ2 347 aaPredicted RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 DTNAQ9Y4J8 743 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 CYTH1Q15438 398 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 INAQ16352 499 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 NOVA2Q9UNW9 492 aaKnown RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 FMNL1O95466 1100 aaPredicted RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 CCND2P30279 289 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 ZAP70P43403 619 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 NME3Q13232 169 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 HIBCHQ6NVY1 386 aaPredicted RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 MAN1C1Q9NR34 630 aa15.21■□□□□ 0.03
HIPK3-201ENST00000303296 ZNF215Q9UL58 517 aaPredicted RBP15.21■□□□□ 0.03
HIPK3-201ENST00000303296 DIS3LQ8TF46 1054 aaKnown RBP15.21■□□□□ 0.02
HIPK3-201ENST00000303296 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.02
HIPK3-201ENST00000303296 GCNT4Q9P109 453 aa15.21■□□□□ 0.02
HIPK3-201ENST00000303296 ARHGEF37A1IGU5 675 aa15.21■□□□□ 0.02
HIPK3-201ENST00000303296 COPEO14579 308 aa15.21■□□□□ 0.02
HIPK3-201ENST00000303296 ICA1Q05084 483 aa15.21■□□□□ 0.02
HIPK3-201ENST00000303296 TRIP4Q15650 581 aaPredicted RBP15.21■□□□□ 0.02
HIPK3-201ENST00000303296 SLC10A5Q5PT55 438 aa15.21■□□□□ 0.02
HIPK3-201ENST00000303296 TBC1D1Q86TI0 1168 aaPredicted RBP15.21■□□□□ 0.02
HIPK3-201ENST00000303296 DBNDD2Q9BQY9 259 aa15.21■□□□□ 0.02
HIPK3-201ENST00000303296 PASD1Q8IV76 773 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 SP110Q9HB58 689 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 NR2F2P24468 414 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 LRRC41Q15345 812 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 CENPUQ71F23 418 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 FAM133AQ8N9E0 248 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 EPN1Q9Y6I3 576 aaPredicted RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 DENND3A2RUS2 1198 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 NBPF26B4DH59 902 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 ASAP2O43150 1006 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 MAP4P27816 1152 aaKnown RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 KRT24Q2M2I5 525 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 NUGGCQ68CJ6 796 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 TRIM11Q96F44 468 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 PLEKHA8Q96JA3 519 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 ELAC2Q9BQ52 826 aaKnown RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 ZNF556Q9HAH1 456 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 TRPC7Q9HCX4 862 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 DHX9Q08211 1270 aaKnown RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 MDH1BQ5I0G3 518 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 ALS2CLQ60I27 953 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 SNX21Q969T3 373 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 USP17L12C9JPN9 530 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 USP17L21D6R901 530 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 TEX28O15482 410 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 PPARAQ07869 468 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 MAPRE1Q15691 268 aaKnown RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 WDR75Q8IWA0 830 aaKnown RBP15.2■□□□□ 0.02
HIPK3-201ENST00000303296 TRIM54Q9BYV2 358 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 KLRF2D3W0D1 207 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 TOMM70O94826 608 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 S100A5P33763 92 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 RFX3P48380 749 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 COG1Q8WTW3 980 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 MTERF3Q96E29 417 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 BCL2L12Q9HB09 334 aa15.2■□□□□ 0.02
HIPK3-201ENST00000303296 TRIM37O94972 964 aa15.19■□□□□ 0.02
HIPK3-201ENST00000303296 INTS4Q96HW7 963 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms