RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 EHMT1Q9H9B1 1298 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 BRMS1Q9HCU9 246 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 KCNH7Q9NS40 1196 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 DDX20Q9UHI6 824 aaKnown RBP6.69□□□□□ -1.34
SSX3-201ENST00000298396 KIF3AQ9Y496 699 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 PCDHGA11Q9Y5H2 935 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 LTBP2Q14767 1821 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 TANC1Q9C0D5 1861 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 FAM187AA6NFU0 413 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 RBAK-RBAKDNI3L0D1 243 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 FIBPO43427 364 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 CCNT1O60563 726 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 DUSP11O75319 330 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 PSMD10O75832 226 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 FARP2O94887 1054 aaPredicted RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 ZIC2O95409 532 aaPredicted RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 GGPS1O95749 300 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 PGK1P00558 417 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 ADH1AP07327 375 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 HSP90AA1P07900 732 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 TXNP10599 105 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 HOXD8P13378 290 aaPredicted RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 ATP2B1P20020 1258 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 CNGA1P29973 690 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 GJA9P57773 515 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 BEX3Q00994 111 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 TNFAIP2Q03169 654 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 MTMR1Q13613 665 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 TTLL4Q14679 1199 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 PTPAQ15257 358 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 LRRC41Q15345 812 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 ZNF174Q15697 407 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 IL17AQ16552 155 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 CELF3Q5SZQ8 465 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 IQSEC1Q6DN90 963 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 CYFIP1Q7L576 1253 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 BRAPQ7Z569 592 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 TLK2Q86UE8 772 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 DIS3LQ8TF46 1054 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 ABHD8Q96I13 439 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 IPO9Q96P70 1041 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 DEFB118Q96PH6 123 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 MTMR9Q96QG7 549 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 IRX2Q9BZI1 471 aaPredicted RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 DDX25Q9UHL0 483 aaKnown RBP6.68□□□□□ -1.34
SSX3-201ENST00000298396 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 OGDHLQ9ULD0 1010 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 FAM184BQ9ULE4 1060 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 CLIC4Q9Y696 253 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 NFASCO94856 1347 aa6.68□□□□□ -1.34
SSX3-201ENST00000298396 GSTTP1A0A1W2PQM5 241 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 B4DLN1 442 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 IPO5O00410 1097 aaKnown RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 EML1O00423 815 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 DYNC1LI2O43237 492 aaPredicted RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 NEMFO60524 1076 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 ATG7O95352 703 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 SGPL1O95470 568 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 GJB1P08034 283 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 TGFB3P10600 412 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 GCFC2P16383 781 aaKnown RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 CST5P28325 142 aaPredicted RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 MCM7P33993 719 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 ZNF76P36508 570 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 TRAPPC10P48553 1259 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 SETQ01105 290 aaPredicted RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 GRIN1Q05586 938 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 ELOAQ14241 798 aaKnown RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 HSDL1Q3SXM5 330 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 UBE2Q1Q7Z7E8 422 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 NLRX1Q86UT6 975 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 TRIM50Q86XT4 487 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 SIX5Q8N196 739 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 DEPDC4Q8N2C3 294 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 OR6J1Q8NGC5 347 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 U2AF1L4Q8WU68 220 aaKnown RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 PPP1R13LQ8WUF5 828 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 AFG1LQ8WV93 481 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 KAT2BQ92831 832 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 USP28Q96RU2 1077 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 PCYT2Q99447 389 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 MPHOSPH6Q99547 160 aaKnown RBP6.67□□□□□ -1.34
SSX3-201ENST00000298396 GPR20Q99678 358 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 SENP7Q9BQF6 1050 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 UNC45AQ9H3U1 944 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 NOD1Q9Y239 953 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 Q9Y3F1 56 aa6.67□□□□□ -1.34
SSX3-201ENST00000298396 PTPRSQ13332 1948 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 DDX39AO00148 427 aaKnown RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 NKRFO15226 690 aaKnown RBP eCLIP6.66□□□□□ -1.34
SSX3-201ENST00000298396 GH1P01241 217 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 MMP3P08254 477 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 ZNF286BP0CG31 522 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 RARBP10826 455 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 EN2P19622 333 aaPredicted RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 GJA8P48165 433 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 NASPP49321 788 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms