RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ATG7O95352 703 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 MYBP10242 640 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 HOXD13P35453 343 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 EDRF1Q3B7T1 1238 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 CREBRFQ8IUR6 639 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 NELFCDQ8IXH7 590 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 DAW1Q8N136 415 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 MYCT1Q8N699 235 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 ATP6V0A1Q93050 837 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 CEP63Q96MT8 703 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 TIPINQ9BVW5 301 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 EFCC1Q9HA90 598 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 POLD4Q9HCU8 107 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 GABBR1Q9UBS5 961 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 PLXNB2O15031 1838 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 SFI1A8K8P3 1242 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 EIF3DO15371 548 aaKnown RBP eCLIP17.17■□□□□ 0.34
LSM6-201ENST00000296581 HIP1RO75146 1068 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 STBD1O95210 358 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 TGFB3P10600 412 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 KNOP1Q1ED39 458 aaKnown RBP17.17■□□□□ 0.34
LSM6-201ENST00000296581 EEF2KMTQ96G04 330 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 TELO2Q9Y4R8 837 aa17.17■□□□□ 0.34
LSM6-201ENST00000296581 ZNF862O60290 1169 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 SUPT20HL2P0C7V6 817 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 SKILP12757 684 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 UBA1P22314 1058 aaKnown RBP17.16■□□□□ 0.34
LSM6-201ENST00000296581 GTF2F1P35269 517 aaKnown RBP eCLIP17.16■□□□□ 0.34
LSM6-201ENST00000296581 MIS18BP1Q6P0N0 1132 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 ZNF526Q8TF50 670 aaPredicted RBP17.16■□□□□ 0.34
LSM6-201ENST00000296581 PTPN18Q99952 460 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 UBE4BO95155 1302 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 MYH9P35579 1960 aaKnown RBP17.16■□□□□ 0.34
LSM6-201ENST00000296581 A0A1W2PQC6 194 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 BACH1O14867 736 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 PRPF6O94906 941 aaKnown RBP17.16■□□□□ 0.34
LSM6-201ENST00000296581 GCNT3O95395 438 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
LSM6-201ENST00000296581 HUNKP57058 714 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 MIIPQ5JXC2 388 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 WDR78Q5VTH9 848 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 SWSAP1Q6NVH7 229 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 ANO5Q75V66 913 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 TSC1Q92574 1164 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 SPTLC3Q9NUV7 552 aa17.16■□□□□ 0.34
LSM6-201ENST00000296581 IGSF9BQ9UPX0 1349 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 PLXNA1Q9UIW2 1896 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 PDXKO00764 312 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 DNM2P50570 870 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 UBXN1Q04323 297 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 NEDD9Q14511 834 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 ZNF720Q7Z2F6 126 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 CCDC60Q8IWA6 550 aaPredicted RBP17.15■□□□□ 0.34
LSM6-201ENST00000296581 TC2NQ8N9U0 490 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 SYNGAP1Q96PV0 1343 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 PARK7Q99497 189 aaKnown RBP17.15■□□□□ 0.34
LSM6-201ENST00000296581 MCM3APO60318 1980 aa17.15■□□□□ 0.34
LSM6-201ENST00000296581 TMEM150BA6NC51 233 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 FARP2O94887 1054 aaPredicted RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 MAPTP10636 758 aaKnown RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 NMT1P30419 496 aaKnown RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 IRX5P78411 483 aaPredicted RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 NOLC1Q14978 699 aaKnown RBP eCLIP17.14■□□□□ 0.33
LSM6-201ENST00000296581 XKR9Q5GH70 373 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 KCNV1Q6PIU1 500 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 OTUD6AQ7L8S5 288 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 CCDC112Q8NEF3 446 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 PRIMPOLQ96LW4 560 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 CCDC43Q96MW1 224 aaKnown RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 STRA6Q9BX79 667 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.14■□□□□ 0.33
LSM6-201ENST00000296581 IGKV6D-21A0A0A0MT36 114 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 SP4Q02446 784 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 ODR4Q5SWX8 454 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 PLA2G4FQ68DD2 849 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 FAM178BQ8IXR5 827 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 ABRAQ8N0Z2 381 aa17.14■□□□□ 0.33
LSM6-201ENST00000296581 C17orf53Q8N3J3 647 aaPredicted RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 NOC4LQ9BVI4 516 aaKnown RBP17.14■□□□□ 0.33
LSM6-201ENST00000296581 NKRFO15226 690 aaKnown RBP eCLIP17.13■□□□□ 0.33
LSM6-201ENST00000296581 GNA14O95837 355 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 NPEPPSP55786 919 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 STXBP4Q6ZWJ1 553 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 RASAL3Q86YV0 1011 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 MAFBQ9Y5Q3 323 aaPredicted RBP17.13■□□□□ 0.33
LSM6-201ENST00000296581 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 ASB14A6NK59 587 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 AKR1B15C9JRZ8 316 aaPredicted RBP17.13■□□□□ 0.33
LSM6-201ENST00000296581 STRNO43815 780 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms