RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 MAP4K1Q92918 833 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 TMEM87BQ96K49 555 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 ZSCAN31Q96LW9 406 aaPredicted RBP12.04□□□□□ -0.48
RFC4-201ENST00000296273 PHF7Q9BWX1 381 aaPredicted RBP12.04□□□□□ -0.48
RFC4-201ENST00000296273 CELF4Q9BZC1 486 aaKnown RBP12.04□□□□□ -0.48
RFC4-201ENST00000296273 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 PCDHB7Q9Y5E2 793 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 PCDHB12Q9Y5F1 795 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
RFC4-201ENST00000296273 SRGAP2BP0DMP2 458 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
RFC4-201ENST00000296273 STAT5BP51692 787 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 NFXL1Q6ZNB6 911 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 FBXL6Q8N531 539 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 SRBD1Q8N5C6 995 aaKnown RBP12.03□□□□□ -0.48
RFC4-201ENST00000296273 MICAL1Q8TDZ2 1067 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 PCYT2Q99447 389 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 SDF4Q9BRK5 362 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 IRF2BPLQ9H1B7 796 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 TLE6Q9H808 572 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 KCNH7Q9NS40 1196 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 PKD2L1Q9P0L9 805 aa12.03□□□□□ -0.48
RFC4-201ENST00000296273 USP15Q9Y4E8 981 aaPredicted RBP12.03□□□□□ -0.48
RFC4-201ENST00000296273 PIEZO1Q92508 2521 aa12.02□□□□□ -0.48
RFC4-201ENST00000296273 PLEKHA8P1O95397 391 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 GLP2RO95838 553 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 MCM5P33992 734 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 LIFRP42702 1097 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 KRT76Q01546 638 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 SIGLEC14Q08ET2 396 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 TMEM62Q0P6H9 643 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 PLCB4Q15147 1175 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 ANKRD1Q15327 319 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 UBE2SQ16763 222 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.49
RFC4-201ENST00000296273 RBM23Q86U06 439 aaKnown RBP12.02□□□□□ -0.49
RFC4-201ENST00000296273 PRSS33Q8NF86 280 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 MXRA8Q9BRK3 442 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 TLR9Q9NR96 1032 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 BARX2Q9UMQ3 279 aaPredicted RBP12.02□□□□□ -0.49
RFC4-201ENST00000296273 TAF6LQ9Y6J9 622 aa12.02□□□□□ -0.49
RFC4-201ENST00000296273 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 GPR182O15218 404 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 PRC1O43663 620 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 HBP1O60381 514 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 RPS6KA5O75582 802 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 ATG7O95352 703 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 CD2BP2O95400 341 aaKnown RBP12.01□□□□□ -0.49
RFC4-201ENST00000296273 FOSP01100 380 aaPredicted RBP12.01□□□□□ -0.49
RFC4-201ENST00000296273 ACTR2P61160 394 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
RFC4-201ENST00000296273 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 MTHFD1LQ6UB35 978 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 SLC24A5Q71RS6 500 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 ATP8B4Q8TF62 1192 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 SUSD6Q92537 303 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 NEK1Q96PY6 1258 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 TMX1Q9H3N1 280 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
RFC4-201ENST00000296273 RGS18Q9NS28 235 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
RFC4-201ENST00000296273 COL1A2P08123 1366 aa12□□□□□ -0.49
RFC4-201ENST00000296273 WDFY4Q6ZS81 3184 aa12□□□□□ -0.49
RFC4-201ENST00000296273 C5orf42Q9H799 3197 aa12□□□□□ -0.49
RFC4-201ENST00000296273 ZNF318Q5VUA4 2279 aa12□□□□□ -0.49
RFC4-201ENST00000296273 DENND3A2RUS2 1198 aa12□□□□□ -0.49
RFC4-201ENST00000296273 SH2B2O14492 632 aaPredicted RBP12□□□□□ -0.49
RFC4-201ENST00000296273 PPFIA3O75145 1194 aa12□□□□□ -0.49
RFC4-201ENST00000296273 FGF18O76093 207 aa12□□□□□ -0.49
RFC4-201ENST00000296273 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
RFC4-201ENST00000296273 DUSP6Q16828 381 aa12□□□□□ -0.49
RFC4-201ENST00000296273 CEP55Q53EZ4 464 aa12□□□□□ -0.49
RFC4-201ENST00000296273 IER5LQ5T953 404 aa12□□□□□ -0.49
RFC4-201ENST00000296273 FAM160B1Q5W0V3 765 aa12□□□□□ -0.49
RFC4-201ENST00000296273 TMEM184AQ6ZMB5 413 aa12□□□□□ -0.49
RFC4-201ENST00000296273 CMTR1Q8N1G2 835 aaKnown RBP12□□□□□ -0.49
RFC4-201ENST00000296273 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
RFC4-201ENST00000296273 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
RFC4-201ENST00000296273 TRAPPC12Q8WVT3 735 aa12□□□□□ -0.49
RFC4-201ENST00000296273 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
RFC4-201ENST00000296273 TMX3Q96JJ7 454 aa12□□□□□ -0.49
RFC4-201ENST00000296273 RPGRIP1Q96KN7 1286 aa12□□□□□ -0.49
RFC4-201ENST00000296273 ELAC1Q9H777 363 aaKnown RBP12□□□□□ -0.49
RFC4-201ENST00000296273 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
RFC4-201ENST00000296273 ERVK-5Q9HDB9 667 aa12□□□□□ -0.49
RFC4-201ENST00000296273 LIMCH1Q9UPQ0 1083 aa12□□□□□ -0.49
RFC4-201ENST00000296273 LZTS1Q9Y250 596 aa12□□□□□ -0.49
RFC4-201ENST00000296273 ZSCAN21Q9Y5A6 473 aaPredicted RBP12□□□□□ -0.49
RFC4-201ENST00000296273 RBM8AQ9Y5S9 174 aaKnown RBP12□□□□□ -0.49
RFC4-201ENST00000296273 SLC12A7Q9Y666 1083 aa12□□□□□ -0.49
RFC4-201ENST00000296273 CYP46A1Q9Y6A2 500 aa12□□□□□ -0.49
RFC4-201ENST00000296273 IGKV6D-21A0A0A0MT36 114 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 TBKBP1A7MCY6 615 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 HMGB1P09429 215 aaKnown RBP11.99□□□□□ -0.49
RFC4-201ENST00000296273 LAG3P18627 525 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 KLRC1P26715 233 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 GATMP50440 423 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms