RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ERBB4Q15303 1308 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 ARVCFO00192 962 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 ADH1CP00326 375 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 SERPINC1P01008 464 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 HMGN5P82970 282 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 GUCY1B3Q02153 619 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 KRT32Q14532 448 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 AMOTQ4VCS5 1084 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 CPLX3Q8WVH0 158 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 HPS3Q969F9 1004 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 MPHOSPH8Q99549 860 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 SH3BP1Q9Y3L3 701 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 PCDHGC5Q9Y5F6 944 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 TTC21BQ7Z4L5 1316 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 TTC21AQ8NDW8 1320 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 UQCRHLA0A096LP55 91 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 IQCA1LA6NCM1 817 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 TBC1D8O95759 1140 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 UQCRHP07919 91 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 XBP1P17861 261 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 IGFALSP35858 605 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 IARSP41252 1262 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 CCT2P78371 535 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 FAPQ12884 760 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 MAP3K11Q16584 847 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 CYFIP1Q7L576 1253 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 BRAPQ7Z569 592 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 OR2C3Q8N628 320 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 RHPN1Q8TCX5 695 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 HERVK_113Q902F9 699 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 TCEANC2Q96MN5 208 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 DCTPP1Q9H773 170 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 TRAV20A0A0B4J274 112 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 RIMBP2O15034 1052 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 KHNYNO15037 678 aaKnown RBP3.28□□□□□ -1.89
HERC4-201ENST00000277817 FBXO24O75426 580 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 AGR2O95994 175 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 HNRNPCP07910 306 aaKnown RBP eCLIP3.28□□□□□ -1.89
HERC4-201ENST00000277817 TLR1Q15399 786 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 PRR16Q569H4 304 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 WDR44Q5JSH3 913 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 STYK1Q6J9G0 422 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 SRLQ86TD4 932 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 NECAB1Q8N987 351 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 ZSCAN1Q8NBB4 408 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 CREB3L4Q8TEY5 395 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 PIBF1Q8WXW3 757 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 CENPIQ92674 756 aaPredicted RBP3.28□□□□□ -1.89
HERC4-201ENST00000277817 PAWRQ96IZ0 340 aaKnown RBP3.28□□□□□ -1.89
HERC4-201ENST00000277817 BHMT2Q9H2M3 363 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 UNC45AQ9H3U1 944 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 CTNNA3Q9UI47 895 aa3.28□□□□□ -1.89
HERC4-201ENST00000277817 FNDC3AQ9Y2H6 1198 aaKnown RBP3.28□□□□□ -1.89
HERC4-201ENST00000277817 LTBP2Q14767 1821 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 STX6O43752 255 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 IFIT1P09914 478 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 GJB2P29033 226 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 NAP1L1P55209 391 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 ATP8B2P98198 1209 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PPFIA1Q13136 1202 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SLC39A6Q13433 755 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 HIF1AQ16665 826 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 KLHL40Q2TBA0 621 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 ZSCAN23Q3MJ62 389 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 UBE3BQ7Z3V4 1068 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 FAM186BQ8IYM0 893 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 OTUD7AQ8TE49 926 aaPredicted RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 CCDC47Q96A33 483 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 AARSD1Q9BTE6 412 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 EHD4Q9H223 541 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 ELAC1Q9H777 363 aaKnown RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 RAB6BQ9NRW1 208 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 HYPKQ9NX55 129 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 SYNPO2Q9UMS6 1093 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 FRMD4BQ9Y2L6 1034 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 TTLL3Q9Y4R7 772 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 A0A1W2PP64 1363 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CCDC69A6NI79 296 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 ARIH2O95376 493 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 MYH3P11055 1940 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 HOXD12P35452 270 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PIP4K2AP48426 406 aaPredicted RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 CDK8P49336 464 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PPP2R2AP63151 447 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 GALNT1Q10472 559 aaPredicted RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 GPS2Q13227 327 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 LRRC32Q14392 662 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CHRNA2Q15822 529 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 C4orf17Q53FE4 359 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 METTL24Q5JXM2 366 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CCDC183Q5T5S1 534 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 FRMPD2Q68DX3 1309 aaPredicted RBP3.27□□□□□ -1.89
HERC4-201ENST00000277817 OVOS1Q6IE37 1185 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 PPP4R4Q6NUP7 873 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CEP85Q6P2H3 762 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 BICDL1Q6ZP65 573 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 G2E3Q7L622 706 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 TRIM22Q8IYM9 498 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 CACNA2D3Q8IZS8 1091 aa3.27□□□□□ -1.89
HERC4-201ENST00000277817 ZGPATQ8N5A5 531 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms