RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 FGGP02679 453 aa29.95■■■□□ 2.39
CBX4-201ENST00000269397 PLCG2P16885 1265 aa29.95■■■□□ 2.39
CBX4-201ENST00000269397 MAP2K2P36507 400 aa29.95■■■□□ 2.39
CBX4-201ENST00000269397 GIT2Q14161 759 aa29.95■■■□□ 2.39
CBX4-201ENST00000269397 NT5DC3Q86UY8 548 aa29.95■■■□□ 2.39
CBX4-201ENST00000269397 CATSPER3Q86XQ3 398 aa29.95■■■□□ 2.39
CBX4-201ENST00000269397 EIF1ADQ8N9N8 165 aaKnown RBP29.95■■■□□ 2.39
CBX4-201ENST00000269397 CNTNAP4Q9C0A0 1308 aa29.95■■■□□ 2.39
CBX4-201ENST00000269397 SMTNP53814 917 aa29.95■■■□□ 2.38
CBX4-201ENST00000269397 EPHA7Q15375 998 aa29.95■■■□□ 2.38
CBX4-201ENST00000269397 FRMD5Q7Z6J6 570 aa29.95■■■□□ 2.38
CBX4-201ENST00000269397 SIX2Q9NPC8 291 aa29.95■■■□□ 2.38
CBX4-201ENST00000269397 PCDHB13Q9Y5F0 798 aa29.95■■■□□ 2.38
CBX4-201ENST00000269397 PPP4R3CPQ6ZMV5 832 aa29.94■■■□□ 2.38
CBX4-201ENST00000269397 STXBP5LQ9Y2K9 1186 aa29.94■■■□□ 2.38
CBX4-201ENST00000269397 BHMG1C9JSJ3 638 aaPredicted RBP29.94■■■□□ 2.38
CBX4-201ENST00000269397 MPHOSPH10O00566 681 aaKnown RBP29.94■■■□□ 2.38
CBX4-201ENST00000269397 RPS6KA4O75676 772 aa29.94■■■□□ 2.38
CBX4-201ENST00000269397 RASSF9O75901 435 aa29.94■■■□□ 2.38
CBX4-201ENST00000269397 GCFC2P16383 781 aaKnown RBP29.94■■■□□ 2.38
CBX4-201ENST00000269397 ARHGEF1Q92888 912 aaKnown RBP29.94■■■□□ 2.38
CBX4-201ENST00000269397 TNRC6CQ9HCJ0 1690 aaKnown RBP29.94■■■□□ 2.38
CBX4-201ENST00000269397 FRMD3A2A2Y4 597 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 CCDC188H7C350 402 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 ZBTB5O15062 677 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 TTLL1O95922 423 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 ABCB4P21439 1286 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 GALCP54803 685 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 IFFO1Q0D2I5 559 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 ZKSCAN4Q969J2 545 aaPredicted RBP29.93■■■□□ 2.38
CBX4-201ENST00000269397 GSCP56915 257 aaPredicted RBP29.93■■■□□ 2.38
CBX4-201ENST00000269397 BYSLQ13895 437 aaKnown RBP29.93■■■□□ 2.38
CBX4-201ENST00000269397 CCDC26Q8TAB7 109 aa29.93■■■□□ 2.38
CBX4-201ENST00000269397 UTP11Q9Y3A2 253 aaKnown RBP29.93■■■□□ 2.38
CBX4-201ENST00000269397 F8VZ95 297 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 DDR1Q08345 913 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 MTMR3Q13615 1198 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 SLFN11Q7Z7L1 901 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 SUCLA2Q9P2R7 463 aaPredicted RBP29.92■■■□□ 2.38
CBX4-201ENST00000269397 GGA2Q9UJY4 613 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 TRAF3IP3Q9Y228 551 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 ATF5Q9Y2D1 282 aaPredicted RBP29.92■■■□□ 2.38
CBX4-201ENST00000269397 ATAD5Q96QE3 1844 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 ARFGEF1Q9Y6D6 1849 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 SFI1A8K8P3 1242 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 PRKCIP41743 596 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 CYP4A11Q02928 519 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 PRR16Q569H4 304 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 PPP1R18Q6NYC8 613 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 GLYCTKQ8IVS8 523 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 RASGEF1CQ8N431 466 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 KCNMB3Q9NPA1 279 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 HAUS2Q9NVX0 235 aa29.92■■■□□ 2.38
CBX4-201ENST00000269397 BUB1BO60566 1050 aaPredicted RBP29.91■■■□□ 2.38
CBX4-201ENST00000269397 DDX4Q9NQI0 724 aaKnown RBP29.91■■■□□ 2.38
CBX4-201ENST00000269397 PPP1R9AQ9ULJ8 1098 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 DAGLAQ9Y4D2 1042 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 NR3C1P04150 777 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 CPLX4Q7Z7G2 160 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 VPS36Q86VN1 386 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 LNX1Q8TBB1 728 aaPredicted RBP29.91■■■□□ 2.38
CBX4-201ENST00000269397 LMBR1Q8WVP7 490 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 SLC35C1Q96A29 364 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 GOPCQ9HD26 462 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 STRCQ7RTU9 1775 aa29.91■■■□□ 2.38
CBX4-201ENST00000269397 SRRM3A6NNA2 597 aaPredicted RBP29.9■■■□□ 2.38
CBX4-201ENST00000269397 ZNF211Q13398 564 aaPredicted RBP29.9■■■□□ 2.38
CBX4-201ENST00000269397 AGBL2Q5U5Z8 902 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 SLITRK6Q9H5Y7 841 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 SHBGP04278 402 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 JAM2P57087 298 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 GABPAQ06546 454 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 ANKRD20A8PQ5CZ79 823 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 CACNA2D3Q8IZS8 1091 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 GLG1Q92896 1179 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 HES6Q96HZ4 224 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 ANO3Q9BYT9 981 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 PNMA2Q9UL42 364 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 NENFQ9UMX5 172 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 IGSF9BQ9UPX0 1349 aa29.9■■■□□ 2.38
CBX4-201ENST00000269397 IGKV6D-41A0A0C4DH26 115 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 CAND2O75155 1236 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 CDR1P51861 262 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 SNAP25P60880 206 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 DCAF12L1Q5VU92 463 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 PSMD1Q99460 953 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 AMFRQ9UKV5 643 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 NHSQ6T4R5 1651 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 ASTN1O14525 1302 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 PITPNM2Q9BZ72 1349 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 SMIM23A6NLE4 172 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 EVI5O60447 810 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 GCNT3O95395 438 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 SLC35G2Q8TBE7 412 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 PCDHA1Q9Y5I3 950 aa29.89■■■□□ 2.38
CBX4-201ENST00000269397 SPATA31A5Q5VU36 1347 aa29.89■■■□□ 2.37
CBX4-201ENST00000269397 SPATA31A7Q8IWB4 1347 aa29.89■■■□□ 2.37
CBX4-201ENST00000269397 ATP8B4Q8TF62 1192 aa29.89■■■□□ 2.37
CBX4-201ENST00000269397 FMO2Q99518 471 aa29.89■■■□□ 2.37
CBX4-201ENST00000269397 P2RX7Q99572 595 aaKnown RBP29.89■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms