RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 PTENP60484 403 aa16.74■□□□□ 0.27
SCAMP2-201ENST00000268099 MECOMQ03112 1051 aa16.74■□□□□ 0.27
SCAMP2-201ENST00000268099 SNX29Q8TEQ0 813 aa16.74■□□□□ 0.27
SCAMP2-201ENST00000268099 DNAJC19Q96DA6 116 aa16.74■□□□□ 0.27
SCAMP2-201ENST00000268099 NUDT12Q9BQG2 462 aa16.74■□□□□ 0.27
SCAMP2-201ENST00000268099 TTC7AQ9ULT0 858 aaPredicted RBP16.74■□□□□ 0.27
SCAMP2-201ENST00000268099 CORO1CQ9ULV4 474 aaPredicted RBP16.74■□□□□ 0.27
SCAMP2-201ENST00000268099 COL4A1P02462 1669 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 A0A0A6YYK5 440 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 AGTP01019 485 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 GOLGA8HP0CJ92 632 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 DR1Q01658 176 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 KLRC3Q07444 240 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 KCNH2Q12809 1159 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 TMEM119Q4V9L6 283 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 NELFCDQ8IXH7 590 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 ERP44Q9BS26 406 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 FGFBP2Q9BYJ0 223 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 CPVLQ9H3G5 476 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 HOMER3Q9NSC5 361 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 GGT7Q9UJ14 662 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 NENFQ9UMX5 172 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 CD2APQ9Y5K6 639 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 USP17L3A6NCW0 530 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 USP17L4A6NCW7 530 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 LIN7AO14910 233 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 OAS1P00973 400 aaKnown RBP16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 H2AFZP0C0S5 128 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 PDE6CP51160 858 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 GALNTL6Q49A17 601 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 H2AFVQ71UI9 128 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 USP17L1Q7RTZ2 530 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 SPICE1Q8N0Z3 855 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 SH3GL3Q99963 347 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 TBC1D7Q9P0N9 293 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 ATP8B3O60423 1300 aa16.73■□□□□ 0.27
SCAMP2-201ENST00000268099 ITGB4P16144 1822 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 GOLGA6L10A0A0M3HER8 536 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 KLRF2D3W0D1 207 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 KRT16P08779 473 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 USP17L8P0C7I0 530 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 UCHL3P15374 230 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 ATF3P18847 181 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 ADCY2Q08462 1091 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 SLC29A2Q14542 456 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 CAVIN4Q5BKX8 364 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 C6orf118Q5T5N4 469 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 KRT79Q5XKE5 535 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 ERICH1Q86X53 443 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 KLHL29Q96CT2 875 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 RAB34Q9BZG1 259 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 DAAM1Q9Y4D1 1078 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 A8MUI8 341 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 SLC9A1P19634 815 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 PRKCIP41743 596 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 PLTPP55058 493 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 COPS2P61201 443 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 BLMHQ13867 455 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 SEPT2Q15019 361 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 DPY19L2P1Q6NXN4 242 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 REXO1Q8N1G1 1221 aaKnown RBP16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 AMFRQ9UKV5 643 aa16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 USP15Q9Y4E8 981 aaPredicted RBP16.72■□□□□ 0.27
SCAMP2-201ENST00000268099 SLC37A4O43826 429 aa16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 IL6STP40189 918 aaPredicted RBP16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 NPEPPSP55786 919 aa16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 BNIP1Q12981 228 aa16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 GBP7Q8N8V2 638 aaPredicted RBP16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 RBM46Q8TBY0 533 aaKnown RBP16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 SPZ1Q9BXG8 430 aa16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 TMEM260Q9NX78 707 aa16.71■□□□□ 0.27
SCAMP2-201ENST00000268099 ANXA13P27216 316 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 ADAM9Q13443 819 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 PDIA5Q14554 519 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 CNGA2Q16280 664 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 PPP2R5EQ16537 467 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 ZDHHC24Q6UX98 284 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 CROCCP2Q86T23 111 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 KIF2BQ8N4N8 673 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 FBXO25Q8TCJ0 367 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 GLG1Q92896 1179 aa16.71■□□□□ 0.26
SCAMP2-201ENST00000268099 FAM187AA6NFU0 413 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 COPB2P35606 906 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 MKRN4PQ13434 485 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 ECM1Q16610 540 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 ANKRD20A2Q5SQ80 823 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 ANKRD20A1Q5TYW2 823 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 DCAF12L1Q5VU92 463 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 ANKRD20A3Q5VUR7 823 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 VPS36Q86VN1 386 aa16.7■□□□□ 0.26
SCAMP2-201ENST00000268099 EPS8L3Q8TE67 593 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms