RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 BLOC1S4Q9NUP1 217 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 HDAC6Q9UBN7 1215 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 STK17AQ9UEE5 414 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 DNM3Q9UQ16 869 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 MROH7Q68CQ1 1323 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 A0A087X0B3 334 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 ZBTB39O15060 712 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 MAGEB2O15479 319 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 GNAT1P11488 350 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 RBL2Q08999 1139 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 SPECC1Q5M775 1068 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 POTEGQ6S5H5 508 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 KCNK18Q7Z418 384 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 FAM126BQ8IXS8 530 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 EXOC8Q8IYI6 725 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 C7orf31Q8N865 590 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 SYT2Q8N9I0 419 aaPredicted RBP15.94■□□□□ 0.14
SSBP1-201ENST00000265304 ENGASEQ8NFI3 743 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 LMBR1Q8WVP7 490 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 PYM1Q9BRP8 204 aaKnown RBP15.94■□□□□ 0.14
SSBP1-201ENST00000265304 CUEDC2Q9H467 287 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 CYP26B1Q9NR63 512 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 DDX19AQ9NUU7 478 aaKnown RBP15.94■□□□□ 0.14
SSBP1-201ENST00000265304 CCDC39Q9UFE4 941 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 USP25Q9UHP3 1055 aa15.94■□□□□ 0.14
SSBP1-201ENST00000265304 DDX11L8A8MPP1 907 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 MAFO75444 373 aaPredicted RBP15.93■□□□□ 0.14
SSBP1-201ENST00000265304 RPLP2P05387 115 aaKnown RBP15.93■□□□□ 0.14
SSBP1-201ENST00000265304 PLCG1P19174 1290 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 TXLNAP40222 546 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 RGS19P49795 217 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 SLC12A3P55017 1021 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 PPFIA1Q13136 1202 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 KARSQ15046 597 aaKnown RBP15.93■□□□□ 0.14
SSBP1-201ENST00000265304 GRIK4Q16099 956 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 CCDC73Q6ZRK6 1079 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 SERINC5Q86VE9 423 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 GBP4Q96PP9 640 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 SETD4Q9NVD3 440 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 KCND2Q9NZV8 630 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 PCDHA2Q9Y5H9 948 aa15.93■□□□□ 0.14
SSBP1-201ENST00000265304 C17orf102A2RUQ5 167 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 GAS2O43903 313 aaKnown RBP15.92■□□□□ 0.14
SSBP1-201ENST00000265304 C22orf31O95567 290 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
SSBP1-201ENST00000265304 MARK3P27448 753 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 RFC5P40937 340 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 GDF6Q6KF10 455 aaPredicted RBP15.92■□□□□ 0.14
SSBP1-201ENST00000265304 CNNM4Q6P4Q7 775 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 CKAP2LQ8IYA6 745 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 ZNF710Q8N1W2 664 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 PIGOQ8TEQ8 1089 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 RAD54LQ92698 747 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 LMBRD1Q9NUN5 540 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 KBTBD4Q9NVX7 518 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 FAM13BQ9NYF5 915 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 KCNH3Q9ULD8 1083 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 TRPC6Q9Y210 931 aa15.92■□□□□ 0.14
SSBP1-201ENST00000265304 SMIM35A0A1B0GVV1 85 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 CCDC85CA6NKD9 419 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 E9PMD0 336 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 DGAT1O75907 488 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 PFKFB1P16118 471 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 CYP11B2P19099 503 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 NPEPPSP55786 919 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 UBE2HP62256 183 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 SNW1Q13573 536 aaKnown RBP15.91■□□□□ 0.14
SSBP1-201ENST00000265304 LRRC26Q2I0M4 334 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 RRAGBQ5VZM2 374 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 TAF2Q6P1X5 1199 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 MTHFD1LQ6UB35 978 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 C1orf186Q6ZWK4 172 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 ELOA2Q8IYF1 753 aaPredicted RBP15.91■□□□□ 0.14
SSBP1-201ENST00000265304 FMR1NBQ8N0W7 255 aaPredicted RBP15.91■□□□□ 0.14
SSBP1-201ENST00000265304 IQUBQ8NA54 791 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 MRPS27Q92552 414 aaKnown RBP15.91■□□□□ 0.14
SSBP1-201ENST00000265304 JPH2Q9BR39 696 aaPredicted RBP15.91■□□□□ 0.14
SSBP1-201ENST00000265304 BHMT2Q9H2M3 363 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 MAGEF1Q9HAY2 307 aa15.91■□□□□ 0.14
SSBP1-201ENST00000265304 TMEM150BA6NC51 233 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 TREHO43280 583 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 CAND2O75155 1236 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 GADD45BO75293 160 aaPredicted RBP15.9■□□□□ 0.14
SSBP1-201ENST00000265304 SLFN14P0C7P3 912 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 GUCY2CP25092 1073 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 KLRC1P26715 233 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 NDUFA8P51970 172 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 TLE2Q04725 743 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 PTK7Q13308 1070 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
SSBP1-201ENST00000265304 TRIM71Q2Q1W2 868 aaKnown RBP15.9■□□□□ 0.14
SSBP1-201ENST00000265304 ARSHQ5FYA8 562 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 XKR9Q5GH70 373 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 SH3RF1Q7Z6J0 888 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 NME8Q8N427 588 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 LARP4BQ92615 738 aaKnown RBP15.9■□□□□ 0.14
SSBP1-201ENST00000265304 KCNN1Q92952 543 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 VTI1AQ96AJ9 217 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 CDK5RAP3Q96JB5 506 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 CEP170P1Q96L14 293 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms