RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 KLC3Q6P597 504 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 TEKT1Q969V4 418 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 DNAJC1Q96KC8 554 aaKnown RBP13.97□□□□□ -0.17
TMEM260-201ENST00000261556 FBXO9Q9UK97 447 aaPredicted RBP13.97□□□□□ -0.17
TMEM260-201ENST00000261556 PNMA3Q9UL41 463 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 RASGRF2O14827 1237 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 ORC4O43929 436 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 CALB2P22676 271 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 CDR2Q01850 454 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 SNX30Q5VWJ9 437 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 HAUS3Q68CZ6 603 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 ANO7Q6IWH7 933 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 ZNF554Q86TJ5 538 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 MMGT1Q8N4V1 131 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 NEK9Q8TD19 979 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 SYNCQ9H7C4 482 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 RABL2AQ9UBK7 228 aaPredicted RBP13.97□□□□□ -0.17
TMEM260-201ENST00000261556 ARL2BPQ9Y2Y0 163 aa13.97□□□□□ -0.17
TMEM260-201ENST00000261556 BTBD18B2RXH4 712 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 DDHD2O94830 711 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 NAT1P18440 290 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 ATP6V1C1P21283 382 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 PTDSS1P48651 473 aaKnown RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 KIF23Q02241 960 aaPredicted RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 IRGCQ6NXR0 463 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 POTEEQ6S8J3 1075 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 BRINP3Q76B58 766 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 TMC4Q7Z404 712 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 PEX26Q7Z412 305 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 SUPT20HQ8NEM7 779 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 FLAD1Q8NFF5 587 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 CASKIN2Q8WXE0 1202 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 CCDC77Q9BR77 488 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 ETNK2Q9NVF9 386 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 LRCH1Q9Y2L9 728 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 IKBKGQ9Y6K9 419 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 NPTXRO95502 500 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 ZNF24P17028 368 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 ARL1P40616 181 aaPredicted RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 EIF2B2P49770 351 aaKnown RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 ITGB3BPQ13352 177 aaPredicted RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 RIBC1Q8N443 379 aaPredicted RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 IMPG2Q9BZV3 1241 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 DBNLQ9UJU6 430 aaKnown RBP13.96□□□□□ -0.17
TMEM260-201ENST00000261556 MYO5CQ9NQX4 1742 aa13.96□□□□□ -0.17
TMEM260-201ENST00000261556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.96□□□□□ -0.18
TMEM260-201ENST00000261556 MX2P20592 715 aa13.96□□□□□ -0.18
TMEM260-201ENST00000261556 CCT6BQ92526 530 aa13.96□□□□□ -0.18
TMEM260-201ENST00000261556 DSCC1Q9BVC3 393 aa13.96□□□□□ -0.18
TMEM260-201ENST00000261556 ZMYND12Q9H0C1 365 aa13.96□□□□□ -0.18
TMEM260-201ENST00000261556 R3HDM1Q15032 1099 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 RASSF3Q86WH2 238 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 SCG3Q8WXD2 468 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 MROH7-TTC4A0A0A0MT08 1334 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 SYNMO15061 1565 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ENTPD5O75356 428 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 CFBP00751 764 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 FGAP02671 866 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 EPB41P11171 864 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 KRT15P19012 456 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 PPP1R2P41236 205 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 PSMD6Q15008 389 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 USH1GQ495M9 461 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 PPP1R2P3Q6NXS1 205 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 PIGBQ92521 554 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 TGS1Q96RS0 853 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 CUEDC2Q9H467 287 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 RNPEPL1Q9HAU8 725 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 SEC31BQ9NQW1 1179 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 HOMER2Q9NSB8 354 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 GINS2Q9Y248 185 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 RAD51CO43502 376 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 HSPD1P10809 573 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ADORA1P30542 326 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 PHEXP78562 749 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 COL9A3Q14050 684 aaPredicted RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 SFMBT2Q5VUG0 894 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 STK32AQ8WU08 396 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 TRAPPC9Q96Q05 1148 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 DCTN4Q9UJW0 460 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 DBR1Q9UK59 544 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ANGPTL2Q9UKU9 493 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ZNF148Q9UQR1 794 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 TRAF3IP3Q9Y228 551 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ARIH1Q9Y4X5 557 aaPredicted RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 TRAF5O00463 557 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 MAPK13O15264 365 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ATP5DP30049 168 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ATICP31939 592 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 KIF11P52732 1056 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 BPIFB4P59827 614 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 INAQ16352 499 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms