RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 HEMGNQ9BXL5 484 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 ZMYND12Q9H0C1 365 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 K7ERI5 159 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 NFX1Q12986 1120 aaKnown RBP13.01□□□□□ -0.33
COL8A1-201ENST00000261037 MTRQ99707 1265 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 KRT82Q9NSB4 513 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 NFU1Q9UMS0 254 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 PI4K2BG5E9Z4 385 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 PMLP29590 882 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ANGPTL8Q6UXH0 198 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 SYNE4Q8N205 404 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 TTLL11Q8NHH1 800 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
COL8A1-201ENST00000261037 SPHKAPQ2M3C7 1700 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 SIRT2Q8IXJ6 389 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 EPS15L1Q9UBC2 864 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ANKARQ7Z5J8 1434 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ERVV-1B6SEH8 477 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 FGGP02679 453 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 MTMR1Q13613 665 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 RASIP1Q5U651 963 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 SFR1Q86XK3 245 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 TRIM42Q8IWZ5 723 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 OXER1Q8TDS5 423 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 TBRG4Q969Z0 631 aaKnown RBP eCLIP13□□□□□ -0.33
COL8A1-201ENST00000261037 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 TSR3Q9UJK0 312 aaKnown RBP13□□□□□ -0.33
COL8A1-201ENST00000261037 DNAJC12Q9UKB3 198 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ORC6Q9Y5N6 252 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 RASGRF2O14827 1237 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 PALMO75781 387 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 RESP18Q5W5W9 173 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 NGRNQ9NPE2 291 aaKnown RBP13□□□□□ -0.33
COL8A1-201ENST00000261037 ATG3Q9NT62 314 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 WDR64B1ANS9 1081 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 E9PMD0 336 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 MMP10P09238 476 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ART3Q13508 389 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 KRT33BQ14525 404 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 LCA5Q86VQ0 697 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 PYROXD1Q8WU10 500 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 FAM81BQ96LP2 452 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ABCB6Q9NP58 842 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 ADAMTS1Q9UHI8 967 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 MOSPD1Q9UJG1 213 aa13□□□□□ -0.33
COL8A1-201ENST00000261037 A2ML1A8K2U0 1454 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 GOLGA8QA0A0J9YX86 632 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 GOLGA8OA6NCC3 632 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 GOLGA8NF8WBI6 632 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 APOEP02649 317 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 DYDC2Q96IM9 177 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 SAYSD1Q9NPB0 183 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L15C9J2P7 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L10C9JJH3 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L13C9JLJ4 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L11C9JVI0 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L18D6R9N7 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L22D6RA61 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L17D6RBQ6 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L19D6RCP7 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L20D6RJB6 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 SLC16A4O15374 487 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L24Q0WX57 530 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 USP17L6PQ6QN14 398 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 TRMT10CQ7L0Y3 403 aaKnown RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 GCNAQ96QF7 691 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 TDRD3Q9H7E2 651 aaKnown RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 MYL1P05976 194 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 GFPT1Q06210 699 aaPredicted RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 ARL13BQ3SXY8 428 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 ARMCX2Q7L311 632 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 SLC44A5Q8NCS7 719 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 TTC1Q99614 292 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 TRIM4Q9C037 500 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 GOLPH3LQ9H4A5 285 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 SLITRK6Q9H5Y7 841 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 ATP6V0A4Q9HBG4 840 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 RRP15Q9Y3B9 282 aaKnown RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 CDK12Q9NYV4 1490 aaPredicted RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 CCDC195A0A1B0GUA6 201 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 PRDX5P30044 214 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 ELF1P32519 619 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 STAT3P40763 770 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 SEPT2Q15019 361 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 GSPT2Q8IYD1 628 aaKnown RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 PIP4K2CQ8TBX8 421 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 PSPC1Q8WXF1 523 aaKnown RBP12.99□□□□□ -0.33
COL8A1-201ENST00000261037 FMO2Q99518 471 aa12.99□□□□□ -0.33
COL8A1-201ENST00000261037 ERBB3P21860 1342 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 ECE2O60344 883 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 KIF19Q2TAC6 998 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 MASTLQ96GX5 879 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms