RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 SMC2O95347 1197 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 SLC26A2P50443 739 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 GJA9P57773 515 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 IRX5P78411 483 aaPredicted RBP17.37■□□□□ 0.37
GYPC-201ENST00000259254 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 SYT2Q8N9I0 419 aaPredicted RBP17.37■□□□□ 0.37
GYPC-201ENST00000259254 ERCC4Q92889 916 aaPredicted RBP17.37■□□□□ 0.37
GYPC-201ENST00000259254 CEP170P1Q96L14 293 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 KBTBD4Q9NVX7 518 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 ERAP1Q9NZ08 941 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 DBR1Q9UK59 544 aaKnown RBP17.37■□□□□ 0.37
GYPC-201ENST00000259254 MCM3APO60318 1980 aa17.37■□□□□ 0.37
GYPC-201ENST00000259254 ZEB2O60315 1214 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
GYPC-201ENST00000259254 ATP4AP20648 1035 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 CASP1P29466 404 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 SLC12A3P55017 1021 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 NPEPPSP55786 919 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 ASIC1P78348 528 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 ZSCAN23Q3MJ62 389 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 MTERF2Q49AM1 385 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 GNASQ5JWF2 1037 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 ANO5Q75V66 913 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 ELOA2Q8IYF1 753 aaPredicted RBP17.36■□□□□ 0.37
GYPC-201ENST00000259254 SMARCE1Q969G3 411 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 MTRQ99707 1265 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 SH2D3AQ9BRG2 576 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 UPF3AQ9H1J1 476 aaKnown RBP17.36■□□□□ 0.37
GYPC-201ENST00000259254 KIAA1217Q5T5P2 1943 aa17.36■□□□□ 0.37
GYPC-201ENST00000259254 SYCE3A1L190 88 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 MYADML2A6NDP7 307 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 MYMKA6NI61 221 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 USO1O60763 962 aaKnown RBP17.35■□□□□ 0.37
GYPC-201ENST00000259254 MYL1P05976 194 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 HOXD8P13378 290 aaPredicted RBP17.35■□□□□ 0.37
GYPC-201ENST00000259254 RARRES1P49788 294 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
GYPC-201ENST00000259254 CUL4BQ13620 913 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 PLCB4Q15147 1175 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 PADI6Q6TGC4 694 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 DYMQ7RTS9 669 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 ATP8B4Q8TF62 1192 aa17.35■□□□□ 0.37
GYPC-201ENST00000259254 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
GYPC-201ENST00000259254 H3BRB1 525 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 KPNA6O60684 536 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 STBD1O95210 358 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 IDEP14735 1019 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 CYP11B2P19099 503 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
GYPC-201ENST00000259254 RAD51AP2Q09MP3 1159 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 DPYDQ12882 1025 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 SASS6Q6UVJ0 657 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 RNF180Q86T96 592 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 DDX12PQ92771 950 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 CCDC47Q96A33 483 aaKnown RBP17.34■□□□□ 0.37
GYPC-201ENST00000259254 C7orf25Q9BPX7 421 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 C16orf70Q9BSU1 422 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 ANP32EQ9BTT0 268 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 RUSC1Q9BVN2 902 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 TRIM9Q9C026 710 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 ZHX3Q9H4I2 956 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 TUT1Q9H6E5 874 aaKnown RBP17.34■□□□□ 0.37
GYPC-201ENST00000259254 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 KIAA1468Q9P260 1216 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 PCDHA5Q9Y5H7 936 aa17.34■□□□□ 0.37
GYPC-201ENST00000259254 NPHP3-ACAD11A0A0J9YXS1 232 aa17.33■□□□□ 0.36
GYPC-201ENST00000259254 BIN1O00499 593 aa17.33■□□□□ 0.36
GYPC-201ENST00000259254 HBP1O60381 514 aa17.33■□□□□ 0.36
GYPC-201ENST00000259254 ADAMTS4O75173 837 aa17.33■□□□□ 0.36
GYPC-201ENST00000259254 TBCAO75347 108 aaKnown RBP17.33■□□□□ 0.36
GYPC-201ENST00000259254 RINT1Q6NUQ1 792 aa17.33■□□□□ 0.36
GYPC-201ENST00000259254 DPF3Q92784 378 aa17.33■□□□□ 0.36
GYPC-201ENST00000259254 OGDHLQ9ULD0 1010 aa17.33■□□□□ 0.36
GYPC-201ENST00000259254 H0YGN5 161 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 SLC34A2O95436 690 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 F2P00734 622 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 RPN1P04843 607 aaKnown RBP17.32■□□□□ 0.36
GYPC-201ENST00000259254 PSEN2P49810 448 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
GYPC-201ENST00000259254 IGBP1P78318 339 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 MFSD10Q14728 455 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 MAEAQ7L5Y9 396 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 DIS3LQ8TF46 1054 aaKnown RBP17.32■□□□□ 0.36
GYPC-201ENST00000259254 PAWRQ96IZ0 340 aaKnown RBP17.32■□□□□ 0.36
GYPC-201ENST00000259254 MTG1Q9BT17 334 aaPredicted RBP17.32■□□□□ 0.36
GYPC-201ENST00000259254 KATNAL1Q9BW62 490 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 NIFKQ9BYG3 293 aaKnown RBP17.32■□□□□ 0.36
GYPC-201ENST00000259254 RNPEPQ9H4A4 650 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 RMND1Q9NWS8 449 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 KCND2Q9NZV8 630 aa17.32■□□□□ 0.36
GYPC-201ENST00000259254 DGAT1O75907 488 aa17.31■□□□□ 0.36
GYPC-201ENST00000259254 FAM13AO94988 1023 aa17.31■□□□□ 0.36
GYPC-201ENST00000259254 NKX3-2P78367 333 aa17.31■□□□□ 0.36
GYPC-201ENST00000259254 PURAQ00577 322 aaKnown RBP17.31■□□□□ 0.36
GYPC-201ENST00000259254 PPFIA1Q13136 1202 aa17.31■□□□□ 0.36
GYPC-201ENST00000259254 KCNA10Q16322 511 aa17.31■□□□□ 0.36
GYPC-201ENST00000259254 KIAA0753Q2KHM9 967 aa17.31■□□□□ 0.36
GYPC-201ENST00000259254 ARSHQ5FYA8 562 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms