RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RAB21Q9UL25 225 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 GJA3Q9Y6H8 435 aa23.8■■□□□ 1.4
CLN6-201ENST00000249806 EIF3DO15371 548 aaKnown RBP eCLIP23.79■■□□□ 1.4
CLN6-201ENST00000249806 DHX15O43143 795 aaKnown RBP23.79■■□□□ 1.4
CLN6-201ENST00000249806 TACC1O75410 805 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 EPB41P11171 864 aaKnown RBP23.79■■□□□ 1.4
CLN6-201ENST00000249806 MUTP22033 750 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 PON1P27169 355 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 BRD3Q15059 726 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 LONRF2Q1L5Z9 754 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 SLC35C1Q96A29 364 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 MYH11P35749 1972 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 VCAM1P19320 739 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 ZNF131P52739 623 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 EXOC3L4Q17RC7 722 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 MIER3Q7Z3K6 550 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 MCF2L2Q86YR7 1114 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 FAM178BQ8IXR5 827 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 SYTL5Q8TDW5 730 aaPredicted RBP23.79■■□□□ 1.4
CLN6-201ENST00000249806 TAAR1Q96RJ0 339 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 FUT8Q9BYC5 575 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 AIPL1Q9NZN9 384 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 CNOT7Q9UIV1 285 aaKnown RBP23.79■■□□□ 1.4
CLN6-201ENST00000249806 JRKLQ9Y4A0 524 aa23.79■■□□□ 1.4
CLN6-201ENST00000249806 RBAK-RBAKDNI3L0D1 243 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 PJA2O43164 708 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 BCRP11274 1271 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 ITGB3BPQ13352 177 aaPredicted RBP23.78■■□□□ 1.4
CLN6-201ENST00000249806 TKFCQ3LXA3 575 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 ODR4Q5SWX8 454 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 MAEAQ7L5Y9 396 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 METTL14Q9HCE5 456 aaKnown RBP23.78■■□□□ 1.4
CLN6-201ENST00000249806 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 POTEB2H3BUK9 544 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 PDE2AO00408 941 aaPredicted RBP23.78■■□□□ 1.4
CLN6-201ENST00000249806 UCHL3P15374 230 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 EIF2AK2P19525 551 aaKnown RBP23.78■■□□□ 1.4
CLN6-201ENST00000249806 RPS6P62753 249 aaKnown RBP23.78■■□□□ 1.4
CLN6-201ENST00000249806 VSNL1P62760 191 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 KLHDC7AQ5VTJ3 777 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 BORCS6Q96GS4 357 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.78■■□□□ 1.4
CLN6-201ENST00000249806 RNF216Q9NWF9 866 aaPredicted RBP23.78■■□□□ 1.4
CLN6-201ENST00000249806 ADAMTS1Q9UHI8 967 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 FZD1Q9UP38 647 aa23.78■■□□□ 1.4
CLN6-201ENST00000249806 SLC16A3O15427 465 aaKnown RBP23.77■■□□□ 1.4
CLN6-201ENST00000249806 ATP8B1O43520 1251 aa23.77■■□□□ 1.4
CLN6-201ENST00000249806 BUB1O43683 1085 aa23.77■■□□□ 1.4
CLN6-201ENST00000249806 RPS12P25398 132 aaKnown RBP23.77■■□□□ 1.4
CLN6-201ENST00000249806 KLHL30Q0D2K2 578 aa23.77■■□□□ 1.4
CLN6-201ENST00000249806 SPP2Q13103 211 aa23.77■■□□□ 1.4
CLN6-201ENST00000249806 RPAP3Q9H6T3 665 aaPredicted RBP23.77■■□□□ 1.4
CLN6-201ENST00000249806 PPP1R9AQ9ULJ8 1098 aa23.77■■□□□ 1.4
CLN6-201ENST00000249806 A0A087X0T9 212 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 ARHGEF35A5YM69 484 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 FAM228BP0C875 321 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 PRAMEF18Q5VWM3 479 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 PCNX4Q63HM2 1172 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 DAW1Q8N136 415 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 WNK4Q96J92 1243 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 AGO4Q9HCK5 861 aaKnown RBP23.76■■□□□ 1.39
CLN6-201ENST00000249806 PLCB1Q9NQ66 1216 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 ODF2LQ9ULJ1 636 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 SAMM50Q9Y512 469 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 UBIAD1Q9Y5Z9 338 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 HIP1RO75146 1068 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 ASIC2Q16515 512 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 BEND6Q5SZJ8 279 aaPredicted RBP23.76■■□□□ 1.39
CLN6-201ENST00000249806 SH2D3AQ9BRG2 576 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 ABCB6Q9NP58 842 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 KCND2Q9NZV8 630 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 SEL1LQ9UBV2 794 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 SNX12Q9UMY4 172 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 ZHX2Q9Y6X8 837 aa23.76■■□□□ 1.39
CLN6-201ENST00000249806 BRCA1P38398 1863 aaKnown RBP23.76■■□□□ 1.39
CLN6-201ENST00000249806 MAPK7Q13164 816 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 MTMR1Q13613 665 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 PLS1Q14651 629 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 SLC18A3Q16572 532 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 PADI6Q6TGC4 694 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 IRF2BP2Q7Z5L9 587 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 HNRNPLLQ8WVV9 542 aaKnown RBP23.75■■□□□ 1.39
CLN6-201ENST00000249806 P4HBP07237 508 aaKnown RBP23.75■■□□□ 1.39
CLN6-201ENST00000249806 GUCY2CP25092 1073 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 GHRHRQ02643 423 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 TRMT1LQ7Z2T5 733 aaKnown RBP23.75■■□□□ 1.39
CLN6-201ENST00000249806 FAM186BQ8IYM0 893 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 CAGE1Q8TC20 777 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 COG1Q8WTW3 980 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 ZKSCAN4Q969J2 545 aaPredicted RBP23.75■■□□□ 1.39
CLN6-201ENST00000249806 SPAG5Q96R06 1193 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 PSMB7Q99436 277 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 SUGCTQ9HAC7 445 aa23.75■■□□□ 1.39
CLN6-201ENST00000249806 AJAP1Q9UKB5 411 aaPredicted RBP23.75■■□□□ 1.39
CLN6-201ENST00000249806 MYCLP12524 364 aaPredicted RBP23.74■■□□□ 1.39
CLN6-201ENST00000249806 PSMC2P35998 433 aaKnown RBP23.74■■□□□ 1.39
CLN6-201ENST00000249806 NAP1L1P55209 391 aaKnown RBP23.74■■□□□ 1.39
CLN6-201ENST00000249806 GJB7Q6PEY0 223 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 GBP6Q6ZN66 633 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 CREG2Q8IUH2 290 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms