RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 RFX1P22670 979 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 TCF7P36402 384 aaPredicted RBP13.82□□□□□ -0.2
RFPL3-201ENST00000249007 HAND2P61296 217 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 IGBP1P78318 339 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 MRPS9P82933 396 aaKnown RBP13.82□□□□□ -0.2
RFPL3-201ENST00000249007 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 FAM102BQ5T8I3 360 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 KAT14Q9H8E8 782 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 ERAP1Q9NZ08 941 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 DUSP12Q9UNI6 340 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
RFPL3-201ENST00000249007 NFX1Q12986 1120 aaKnown RBP13.81□□□□□ -0.2
RFPL3-201ENST00000249007 TMEM266Q2M3C6 531 aa13.81□□□□□ -0.2
RFPL3-201ENST00000249007 C12orf76Q8N812 135 aaPredicted RBP13.81□□□□□ -0.2
RFPL3-201ENST00000249007 ESR2Q92731 530 aa13.81□□□□□ -0.2
RFPL3-201ENST00000249007 ACSF2Q96CM8 615 aaPredicted RBP13.81□□□□□ -0.2
RFPL3-201ENST00000249007 ZBTB10Q96DT7 871 aa13.81□□□□□ -0.2
RFPL3-201ENST00000249007 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
RFPL3-201ENST00000249007 RTEL1Q9NZ71 1219 aa13.81□□□□□ -0.2
RFPL3-201ENST00000249007 ASPMQ8IZT6 3477 aa13.81□□□□□ -0.2
RFPL3-201ENST00000249007 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
RFPL3-201ENST00000249007 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 PDE4AP27815 886 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 PPM1AP35813 382 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 ATXN1P54253 815 aaKnown RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 KRT17Q04695 432 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 XRRA1Q6P2D8 792 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 MRPL43Q8N983 215 aaKnown RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 PI4K2BQ8TCG2 481 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 GLG1Q92896 1179 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 SENP7Q9BQF6 1050 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 CELF4Q9BZC1 486 aaKnown RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 CHMP4BQ9H444 224 aaKnown RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 CWH43Q9H720 699 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 DENND3A2RUS2 1198 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 C2orf71A6NGG8 1288 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 MGEA5O60502 916 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 SP9P0CG40 484 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 FGFR1P11362 822 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 ANP32AP39687 249 aaKnown RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 TBC1D8BQ0IIM8 1120 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 KANK3Q6NY19 840 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 KCNT2Q6UVM3 1135 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 SLC24A5Q71RS6 500 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 IQCA1Q86XH1 822 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 SUMF1Q8NBK3 374 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 ADAM2Q99965 735 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 RNF41Q9H4P4 317 aaPredicted RBP13.8□□□□□ -0.2
RFPL3-201ENST00000249007 KCNK12Q9HB15 430 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 C1orf112Q9NSG2 853 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 DZANK1Q9NVP4 752 aa13.8□□□□□ -0.2
RFPL3-201ENST00000249007 RRN3P2A6NIE6 340 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 ZBTB5O15062 677 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 CA8P35219 290 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 PBX3P40426 434 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
RFPL3-201ENST00000249007 COL9A2Q14055 689 aaPredicted RBP13.79□□□□□ -0.2
RFPL3-201ENST00000249007 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 GIMAP8Q8ND71 665 aaPredicted RBP13.79□□□□□ -0.2
RFPL3-201ENST00000249007 ZNF558Q96NG5 402 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 NCDNQ9UBB6 729 aa13.79□□□□□ -0.2
RFPL3-201ENST00000249007 CDV3Q9UKY7 258 aaKnown RBP13.79□□□□□ -0.2
RFPL3-201ENST00000249007 ZMYM6O95789 1325 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 NEDD4P46934 1319 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 FRYQ5TBA9 3013 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 C9IYK1 514 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
RFPL3-201ENST00000249007 CFHP08603 1231 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 INSRRP14616 1297 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 KRT76Q01546 638 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 SPECC1Q5M775 1068 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 TMC5Q6UXY8 1006 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
RFPL3-201ENST00000249007 CCDC149Q6ZUS6 474 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 SEPT1Q8WYJ6 367 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 SMARCAD1Q9H4L7 1026 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 RGS18Q9NS28 235 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 SPG21Q9NZD8 308 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 WNT16Q9UBV4 365 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 RALYQ9UKM9 306 aaKnown RBP13.78□□□□□ -0.2
RFPL3-201ENST00000249007 GINS2Q9Y248 185 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 DENND4AQ7Z401 1863 aa13.78□□□□□ -0.2
RFPL3-201ENST00000249007 BAZ2BQ9UIF8 2168 aaKnown RBP13.78□□□□□ -0.2
RFPL3-201ENST00000249007 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.2
RFPL3-201ENST00000249007 KRBA1A5PL33 1030 aa13.77□□□□□ -0.21
RFPL3-201ENST00000249007 NARSO43776 548 aaKnown RBP13.77□□□□□ -0.21
RFPL3-201ENST00000249007 TRAF1Q13077 416 aa13.77□□□□□ -0.21
RFPL3-201ENST00000249007 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
RFPL3-201ENST00000249007 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
RFPL3-201ENST00000249007 STAG2Q8N3U4 1231 aa13.77□□□□□ -0.21
RFPL3-201ENST00000249007 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
RFPL3-201ENST00000249007 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.21
RFPL3-201ENST00000249007 MTMR8Q96EF0 704 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms