RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 NBPF9Q3BBW0 867 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 TMC3Q7Z5M5 1100 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 ACTRT1Q8TDG2 376 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 TMOD4Q9NZQ9 345 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 NARFQ9UHQ1 456 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 GGT7Q9UJ14 662 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 IGSF9BQ9UPX0 1349 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 TMEM110-MUSTN1A8MSY1 372 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 GCNT3O95395 438 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 PLTPP55058 493 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 DPY19L2P1Q6NXN4 242 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 SNX24Q9Y343 169 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 SPDYE3A6NKU9 549 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 FLOT1O75955 427 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 ZNF543Q08ER8 600 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 RUFY4Q6ZNE9 571 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 SPATS2Q86XZ4 545 aaKnown RBP20.24■□□□□ 0.83
CHPF-201ENST00000243776 NT5C3AQ9H0P0 336 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 ERVK-5Q9HDB9 667 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 BYSLQ13895 437 aaKnown RBP20.23■□□□□ 0.83
CHPF-201ENST00000243776 ARHGAP44Q17R89 818 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 USH1GQ495M9 461 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 CACNA2D3Q8IZS8 1091 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 RDH13Q8NBN7 331 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 ARHGEF1Q92888 912 aaKnown RBP20.23■□□□□ 0.83
CHPF-201ENST00000243776 CCDC113Q9H0I3 377 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 DDX4Q9NQI0 724 aaKnown RBP20.23■□□□□ 0.83
CHPF-201ENST00000243776 UTP11Q9Y3A2 253 aaKnown RBP20.23■□□□□ 0.83
CHPF-201ENST00000243776 SCNN1DP51172 638 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 GTF2IP78347 998 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 GIT2Q14161 759 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 LRIG3Q6UXM1 1119 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 NT5DC3Q86UY8 548 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 TAS2R14Q9NYV8 317 aa20.23■□□□□ 0.83
CHPF-201ENST00000243776 F8VZ95 297 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 ZBTB39O15060 712 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 CTNND1O60716 968 aaKnown RBP20.22■□□□□ 0.83
CHPF-201ENST00000243776 SMTNP53814 917 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 SLC12A3P55017 1021 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 KNOP1Q1ED39 458 aaKnown RBP20.22■□□□□ 0.83
CHPF-201ENST00000243776 ASPRV1Q53RT3 343 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 PALB2Q86YC2 1186 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 KIRREL3Q8IZU9 778 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 CYP2W1Q8TAV3 490 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 SLC35G2Q8TBE7 412 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 PIGOQ8TEQ8 1089 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 PCDHA1Q9Y5I3 950 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 FRMD3A2A2Y4 597 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 KRT13P13646 458 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 IFNAR2P48551 515 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 COG2Q14746 738 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 ZC2HC1CQ53FD0 456 aaPredicted RBP20.22■□□□□ 0.83
CHPF-201ENST00000243776 LNX1Q8TBB1 728 aaPredicted RBP20.22■□□□□ 0.83
CHPF-201ENST00000243776 P2RX7Q99572 595 aaKnown RBP20.22■□□□□ 0.83
CHPF-201ENST00000243776 BHMT2Q9H2M3 363 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 RGL1Q9NZL6 768 aa20.22■□□□□ 0.83
CHPF-201ENST00000243776 NR3C1P04150 777 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 PLS1Q14651 629 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 ANKRD20A8PQ5CZ79 823 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 EMC10Q5UCC4 262 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 MTFR1LQ9H019 292 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 MYH7BA7E2Y1 1941 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 EVI5O60447 810 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 RASSF9O75901 435 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 ZBTB48P10074 688 aaPredicted RBP20.21■□□□□ 0.83
CHPF-201ENST00000243776 EPHA7Q15375 998 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 IFI16Q16666 785 aaKnown RBP20.21■□□□□ 0.83
CHPF-201ENST00000243776 CCDC38Q502W7 563 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 DCAF12L1Q5VU92 463 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 CCDC26Q8TAB7 109 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 ARHGEF26Q96DR7 871 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 SIX2Q9NPC8 291 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 AMFRQ9UKV5 643 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 HGSO14964 777 aaPredicted RBP20.21■□□□□ 0.83
CHPF-201ENST00000243776 LRRN2O75325 713 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 ORC2Q13416 577 aaPredicted RBP20.21■□□□□ 0.83
CHPF-201ENST00000243776 GRAPQ13588 217 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 CYB5D1Q6P9G0 228 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 YTHDF3Q7Z739 585 aaKnown RBP20.21■□□□□ 0.83
CHPF-201ENST00000243776 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
CHPF-201ENST00000243776 TBC1D31Q96DN5 1066 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 PSMD1Q99460 953 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 FMO2Q99518 471 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
CHPF-201ENST00000243776 TRIM49P0CI25 452 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 TRIM49CP0CI26 452 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 NMT1P30419 496 aaKnown RBP20.2■□□□□ 0.82
CHPF-201ENST00000243776 SCTRP47872 440 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 MARSP56192 900 aaKnown RBP20.2■□□□□ 0.82
CHPF-201ENST00000243776 IFI35P80217 286 aaPredicted RBP20.2■□□□□ 0.82
CHPF-201ENST00000243776 DAGLAQ9Y4D2 1042 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 DDX60LQ5H9U9 1706 aaKnown RBP20.2■□□□□ 0.82
CHPF-201ENST00000243776 KDM3AQ9Y4C1 1321 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 ZBTB5O15062 677 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 TTLL1O95922 423 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 CLK2P49760 499 aaKnown RBP20.2■□□□□ 0.82
CHPF-201ENST00000243776 CACNB3P54284 484 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 SEPT2Q15019 361 aa20.2■□□□□ 0.82
CHPF-201ENST00000243776 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms