RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 NRCAMQ92823 1304 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 A0A0U1RQG5 324 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-201ENST00000235958 FAM237AA0A1B0GTK4 181 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 EYA4O95677 639 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 PFKFB1P16118 471 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 KLRC1P26715 233 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 NDUFA8P51970 172 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 SOX10P56693 466 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 IGBP1P78318 339 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 ZNF200P98182 395 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-201ENST00000235958 PPFIA1Q13136 1202 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 GRIK4Q16099 956 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 MTERF2Q49AM1 385 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 XKR9Q5GH70 373 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 MARCH8Q5T0T0 291 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 PLA2G4FQ68DD2 849 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 CCDC73Q6ZRK6 1079 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 SESTD1Q86VW0 696 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 IQUBQ8NA54 791 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 LRRC15Q8TF66 581 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 MRPS27Q92552 414 aaKnown RBP11.35□□□□□ -0.59
HMGCL-201ENST00000235958 CEP170P1Q96L14 293 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 CEP89Q96ST8 783 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 SEZ6LQ9BYH1 1024 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 CYP26B1Q9NR63 512 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 LMBRD1Q9NUN5 540 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 BLOC1S4Q9NUP1 217 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-201ENST00000235958 HPSEQ9Y251 543 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 KDM3AQ9Y4C1 1321 aa11.35□□□□□ -0.59
HMGCL-201ENST00000235958 C17orf102A2RUQ5 167 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 PLA2G4BP0C869 781 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 GNAT1P11488 350 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 HOXC8P31273 242 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 SYKP43405 635 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 RARRES1P49788 294 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 UBE2HP62256 183 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 ADAM17P78536 824 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 PTPN11Q06124 597 aaPredicted RBP11.34□□□□□ -0.59
HMGCL-201ENST00000235958 DHX8Q14562 1220 aaKnown RBP11.34□□□□□ -0.59
HMGCL-201ENST00000235958 MCM6Q14566 821 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 NAALADL2Q58DX5 795 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 GDF6Q6KF10 455 aaPredicted RBP11.34□□□□□ -0.59
HMGCL-201ENST00000235958 SYT2Q8N9I0 419 aaPredicted RBP11.34□□□□□ -0.59
HMGCL-201ENST00000235958 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 ZBTB10Q96DT7 871 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 TRPV6Q9H1D0 765 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 BHMT2Q9H2M3 363 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 GOLPH3LQ9H4A5 285 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 GTF2IRD1Q9UHL9 959 aa11.34□□□□□ -0.59
HMGCL-201ENST00000235958 ARHGEF35A5YM69 484 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 GOLGA6L22H0YM25 854 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 MAGEB2O15479 319 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 TREHO43280 583 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 ZNF202O95125 648 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 SSBP05455 408 aaKnown RBP eCLIP11.33□□□□□ -0.6
HMGCL-201ENST00000235958 LIG1P18858 919 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 MCM4P33991 863 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 STAT6P42226 847 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 SNW1Q13573 536 aaKnown RBP11.33□□□□□ -0.6
HMGCL-201ENST00000235958 E2F4Q16254 413 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 LRRC26Q2I0M4 334 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 LONRF3Q496Y0 759 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 PADI6Q6TGC4 694 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 MTHFD1LQ6UB35 978 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 FMR1NBQ8N0W7 255 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-201ENST00000235958 ENGASEQ8NFI3 743 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 RAD54LQ92698 747 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 DHX58Q96C10 678 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 SUGCTQ9HAC7 445 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 STK17AQ9UEE5 414 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
HMGCL-201ENST00000235958 COL1A2P08123 1366 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 MBLAC1A4D2B0 266 aaPredicted RBP11.32□□□□□ -0.6
HMGCL-201ENST00000235958 B4GALT4O60513 344 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 MAFO75444 373 aaPredicted RBP11.32□□□□□ -0.6
HMGCL-201ENST00000235958 SLFN14P0C7P3 912 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 CYP11B2P19099 503 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 TLE2Q04725 743 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 FAM160A1Q05DH4 1040 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 TBC1D8BQ0IIM8 1120 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 SNX17Q15036 470 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 PTGISQ16647 500 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 ARSHQ5FYA8 562 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 EFCAB12Q6NXP0 572 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 SV2BQ7L1I2 683 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 ANKRD33Q7Z3H0 272 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 EXOC8Q8IYI6 725 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 METTL13Q8N6R0 699 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 LARP4BQ92615 738 aaKnown RBP11.32□□□□□ -0.6
HMGCL-201ENST00000235958 STAMQ92783 540 aa11.32□□□□□ -0.6
HMGCL-201ENST00000235958 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms