RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZNF233A6NK53 670 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 ORC2Q13416 577 aaPredicted RBP10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 NAB2Q15742 525 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 TRIM59Q8IWR1 403 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 RNF10Q8N5U6 811 aaKnown RBP10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 NSMCE1Q8WV22 266 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 CASKIN2Q8WXE0 1202 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 MXD3Q9BW11 206 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZCWPW1Q9H0M4 648 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 DAGLAQ9Y4D2 1042 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 PLA2G4BP0C869 781 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 SNHG28P0DPA3 235 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 SLC9A1P19634 815 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 CLK2P49760 499 aaKnown RBP10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 GTF2IP78347 998 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 ADAM9Q13443 819 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 CRYMQ14894 314 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 RBBP5Q15291 538 aaKnown RBP10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 SLC18A3Q16572 532 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PPP4R3AQ6IN85 833 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 NLRP14Q86W24 1093 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 KLHL7Q8IXQ5 586 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 CAVIN3Q969G5 261 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 SAAL1Q96ER3 474 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 STAMBPL1Q96FJ0 436 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 GDF3Q9NR23 364 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 EMILIN3Q9NT22 766 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PNMA6FA0A0J9YX94 578 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 GRID2IPA4D2P6 1211 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 SMIM23A6NLE4 172 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 IL1R1P14778 569 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 NR1D1P20393 614 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PTGER2P43116 358 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PSMC6P62333 389 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZNF543Q08ER8 600 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 KLHL30Q0D2K2 578 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 ASPRV1Q53RT3 343 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 ARSHQ5FYA8 562 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 MEI1Q5TIA1 1274 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PRR5LQ6MZQ0 368 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 TBC1D1Q86TI0 1168 aaPredicted RBP10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 GPBP1Q86WP2 473 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PROM2Q8N271 834 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 KCTD10Q9H3F6 313 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 GGT7Q9UJ14 662 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 POTEFA5A3E0 1075 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 MEIS1O00470 390 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 RIMBP2O15034 1052 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 MED24O75448 989 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 CYP11B2P19099 503 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PTK2Q05397 1052 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 GABPAQ06546 454 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 KCNH2Q12809 1159 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 POTEEQ6S8J3 1075 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 CEP120Q8N960 986 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 RPGRQ92834 1020 aaKnown RBP10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 INPP4AQ96PE3 977 aaPredicted RBP10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 EDEM3Q9BZQ6 932 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 GGA1Q9UJY5 639 aa10.26□□□□□ -0.77
HLA-DOA-201ENST00000229829 RAD51CO43502 376 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 IFT20Q8IY31 132 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 CUL5Q93034 780 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 MYH4Q9Y623 1939 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 KLRG2A4D1S0 409 aaPredicted RBP10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 C6orf229H3BNL8 230 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 PLCG2P16885 1265 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 TMOD1P28289 359 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 FNTAP49354 379 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 SNAP25P60880 206 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 ALS2CLQ60I27 953 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 CAPRIN2Q6IMN6 1127 aaKnown RBP10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZNF571Q7Z3V5 609 aaPredicted RBP10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 TAX1BP1Q86VP1 789 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 DDX42Q86XP3 938 aaKnown RBP eCLIP10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 P2RX7Q99572 595 aaKnown RBP10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 GANQ9H2C0 597 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 VCPKMTQ9H867 229 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 STK38LQ9Y2H1 464 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 PCDHGC5Q9Y5F6 944 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 GAKO14976 1311 aa10.25□□□□□ -0.77
HLA-DOA-201ENST00000229829 IGKV6D-41A0A0C4DH26 115 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 FAM196BA6NMK8 535 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 KCNK3O14649 394 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 FSBPO95073 299 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 SMTNP53814 917 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 FAM133BQ5BKY9 247 aaKnown RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 OR2W6PQ8NHA6 318 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 TBC1D16Q8TBP0 767 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 SH3GL3Q99963 347 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms