RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 DMAC2Q9NW81 257 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 FHOD1Q9Y613 1164 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 PAPPA2Q9BXP8 1791 aa21.05■□□□□ 0.96
YBX3-201ENST00000228251 SSC5DA1L4H1 1573 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 LCTP09848 1927 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 VWA5AO00534 786 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 SERPING1P05155 500 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 SPP2Q13103 211 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 PGM5Q15124 567 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 SFMBT2Q5VUG0 894 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 WNK4Q96J92 1243 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 IKZF4Q9H2S9 585 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 ARGLU1Q9NWB6 273 aaPredicted RBP21.04■□□□□ 0.96
YBX3-201ENST00000228251 DBR1Q9UK59 544 aaKnown RBP21.04■□□□□ 0.96
YBX3-201ENST00000228251 ADAMTS5Q9UNA0 930 aa21.04■□□□□ 0.96
YBX3-201ENST00000228251 P4HBP07237 508 aaKnown RBP21.03■□□□□ 0.96
YBX3-201ENST00000228251 ZC2HC1CQ53FD0 456 aaPredicted RBP21.03■□□□□ 0.96
YBX3-201ENST00000228251 MIER3Q7Z3K6 550 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 MKNK1Q9BUB5 465 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 SIX2Q9NPC8 291 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 HDAC6Q9UBN7 1215 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 FBXL5Q9UKA1 691 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 RAB21Q9UL25 225 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 GJA3Q9Y6H8 435 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 ARID2Q68CP9 1835 aa21.03■□□□□ 0.96
YBX3-201ENST00000228251 ENC1O14682 589 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 AKR1B10O60218 316 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 PTPRAP18433 802 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 CBX1P83916 185 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 SECISBP2LQ93073 1101 aaKnown RBP21.02■□□□□ 0.96
YBX3-201ENST00000228251 ATG4CQ96DT6 458 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 PDCD2LQ9BRP1 358 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 ZSWIM4Q9H7M6 989 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 ZHX2Q9Y6X8 837 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 GTPBP10A4D1E9 387 aaKnown RBP21.02■□□□□ 0.96
YBX3-201ENST00000228251 CLIC2O15247 247 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 ZBED4O75132 1171 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 EPB41P11171 864 aaKnown RBP21.02■□□□□ 0.96
YBX3-201ENST00000228251 XRCC5P13010 732 aaKnown RBP21.02■□□□□ 0.96
YBX3-201ENST00000228251 PON1P27169 355 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 SLC9C1Q4G0N8 1177 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 KLHDC7AQ5VTJ3 777 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 TMEM174Q8WUU8 243 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 TRERF1Q96PN7 1200 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 PXMP2Q9NR77 195 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 HOMER2Q9NSB8 354 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 SAR1BQ9Y6B6 198 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 CAPN6Q9Y6Q1 641 aa21.02■□□□□ 0.96
YBX3-201ENST00000228251 PTPRFP10586 1907 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 ARHGEF35A5YM69 484 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 DDX39AO00148 427 aaKnown RBP21.01■□□□□ 0.95
YBX3-201ENST00000228251 USO1O60763 962 aaKnown RBP21.01■□□□□ 0.95
YBX3-201ENST00000228251 HIP1RO75146 1068 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 SLC9A1P19634 815 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 GFPT1Q06210 699 aaPredicted RBP21.01■□□□□ 0.95
YBX3-201ENST00000228251 MTMR1Q13613 665 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 CC2D1AQ6P1N0 951 aaPredicted RBP21.01■□□□□ 0.95
YBX3-201ENST00000228251 APOBEC3FQ8IUX4 373 aaKnown RBP21.01■□□□□ 0.95
YBX3-201ENST00000228251 FAM178BQ8IXR5 827 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 ZNF280CQ8ND82 737 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 DEF6Q9H4E7 631 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 TBC1D22BQ9NU19 505 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 SALL4Q9UJQ4 1053 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 RIPK3Q9Y572 518 aa21.01■□□□□ 0.95
YBX3-201ENST00000228251 POLR2AP24928 1970 aaKnown RBP21.01■□□□□ 0.95
YBX3-201ENST00000228251 MACROD2A1Z1Q3 448 aa21■□□□□ 0.95
YBX3-201ENST00000228251 CTAGE15A4D2H0 777 aa21■□□□□ 0.95
YBX3-201ENST00000228251 SBF1O95248 1867 aa21■□□□□ 0.95
YBX3-201ENST00000228251 CTAGE8P0CG41 777 aa21■□□□□ 0.95
YBX3-201ENST00000228251 PNMA6AP0CW24 399 aaPredicted RBP21■□□□□ 0.95
YBX3-201ENST00000228251 ACTN1P12814 892 aa21■□□□□ 0.95
YBX3-201ENST00000228251 EIF2AK2P19525 551 aaKnown RBP21■□□□□ 0.95
YBX3-201ENST00000228251 MAGEA1P43355 309 aa21■□□□□ 0.95
YBX3-201ENST00000228251 COG2Q14746 738 aa21■□□□□ 0.95
YBX3-201ENST00000228251 PADI6Q6TGC4 694 aa21■□□□□ 0.95
YBX3-201ENST00000228251 IRF2BP2Q7Z5L9 587 aa21■□□□□ 0.95
YBX3-201ENST00000228251 CTAGE6Q86UF2 777 aa21■□□□□ 0.95
YBX3-201ENST00000228251 SLC9A9Q8IVB4 645 aa21■□□□□ 0.95
YBX3-201ENST00000228251 CTAGE4Q8IX94 777 aa21■□□□□ 0.95
YBX3-201ENST00000228251 TRIM58Q8NG06 486 aa21■□□□□ 0.95
YBX3-201ENST00000228251 ZKSCAN4Q969J2 545 aaPredicted RBP21■□□□□ 0.95
YBX3-201ENST00000228251 MLXIPQ9HAP2 919 aa21■□□□□ 0.95
YBX3-201ENST00000228251 AGPAT3Q9NRZ7 376 aa21■□□□□ 0.95
YBX3-201ENST00000228251 PPP1R1BQ9UD71 204 aaPredicted RBP21■□□□□ 0.95
YBX3-201ENST00000228251 ATP8B1O43520 1251 aa21■□□□□ 0.95
YBX3-201ENST00000228251 MAPTP10636 758 aaKnown RBP21■□□□□ 0.95
YBX3-201ENST00000228251 UCHL3P15374 230 aa21■□□□□ 0.95
YBX3-201ENST00000228251 RARRES1P49788 294 aa21■□□□□ 0.95
YBX3-201ENST00000228251 OAZ1P54368 228 aa21■□□□□ 0.95
YBX3-201ENST00000228251 EXOC3L4Q17RC7 722 aa21■□□□□ 0.95
YBX3-201ENST00000228251 ODR4Q5SWX8 454 aa21■□□□□ 0.95
YBX3-201ENST00000228251 ANGEL2Q5VTE6 544 aaKnown RBP21■□□□□ 0.95
YBX3-201ENST00000228251 TMCO3Q6UWJ1 677 aa21■□□□□ 0.95
YBX3-201ENST00000228251 RNF207Q6ZRF8 634 aa21■□□□□ 0.95
YBX3-201ENST00000228251 GPIHBP1Q8IV16 184 aa21■□□□□ 0.95
YBX3-201ENST00000228251 KSR1Q8IVT5 923 aa21■□□□□ 0.95
YBX3-201ENST00000228251 NOA1Q8NC60 698 aaKnown RBP21■□□□□ 0.95
YBX3-201ENST00000228251 TRPM4Q8TD43 1214 aa21■□□□□ 0.95
YBX3-201ENST00000228251 RMDN3Q96TC7 470 aa21■□□□□ 0.95
YBX3-201ENST00000228251 AS3MTQ9HBK9 375 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms