RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 MBTPS1Q14703 1052 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 ECM1Q16610 540 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 TMEM266Q2M3C6 531 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 MTERF2Q49AM1 385 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 FAM49AQ9H0Q0 323 aaPredicted RBP16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 SCN5AQ14524 2016 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 COL1A2P08123 1366 aa16.14■□□□□ 0.17
SUPT4H1-201ENST00000225504 EVPLQ92817 2033 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 BRD1O95696 1058 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 CHRNA1P02708 482 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 SELPP16109 830 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 FPGSQ05932 587 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 LRRC8DQ7L1W4 858 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 DEFB128Q7Z7B8 93 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 KIAA0319LQ8IZA0 1049 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 TMEM199Q8N511 208 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 PIGOQ8TEQ8 1089 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 CHAMP1Q96JM3 812 aa16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 MMTAG2Q9BU76 263 aaKnown RBP16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 UBE2OQ9C0C9 1292 aaKnown RBP16.13■□□□□ 0.17
SUPT4H1-201ENST00000225504 NBNO60934 754 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 LYPLA2O95372 231 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 CTSHP09668 335 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 PDIA4P13667 645 aaKnown RBP16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 YWHABP31946 246 aaKnown RBP16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 TMEM62Q0P6H9 643 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 C9orf50Q5SZB4 431 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 ARL6IP4Q66PJ3 421 aaKnown RBP16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 LRRC71Q8N4P6 559 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 CCDC155Q8N6L0 562 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 POLR3CQ9BUI4 534 aaPredicted RBP16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 CYP26B1Q9NR63 512 aa16.12■□□□□ 0.17
SUPT4H1-201ENST00000225504 SMIM35A0A1B0GVV1 85 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 RSPH10B2B2RC85 870 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 RSPH10BP0C881 870 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 RPA1P27694 616 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 BMP8BP34820 402 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 CCT6AP40227 531 aaKnown RBP16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 DRP2Q13474 957 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 SHHQ15465 462 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 TCTN1Q2MV58 587 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 XKR9Q5GH70 373 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 FAM26DQ5JW98 314 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 EFCAB12Q6NXP0 572 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 TAF2Q6P1X5 1199 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 POTEGQ6S5H5 508 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 RPAINQ86UA6 219 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 METTL13Q8N6R0 699 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 NEK9Q8TD19 979 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 SUGCTQ9HAC7 445 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 CDHR5Q9HBB8 845 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 TUFT1Q9NNX1 390 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
SUPT4H1-201ENST00000225504 DKC1O60832 514 aaKnown RBP eCLIP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 DDIT3P35638 169 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 CLCN3P51790 818 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 PPIGQ13427 754 aaKnown RBP eCLIP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 SLC39A14Q15043 492 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 TMEM240Q5SV17 173 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 ZNF365Q70YC5 407 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 LINC01465Q8N7H1 131 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 TET1Q8NFU7 2136 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 ERMNQ8TAM6 284 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 CEP170P1Q96L14 293 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 CLIC6Q96NY7 704 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.1■□□□□ 0.171e-6■■□□□ 12.2
SUPT4H1-201ENST00000225504 FBXO2Q9UK22 296 aaPredicted RBP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 IGKV6-21A0A0C4DH24 114 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 MAGEB2O15479 319 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 MAFO75444 373 aaPredicted RBP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 BMP15O95972 392 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 VTNP04004 478 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 NASPP49321 788 aaPredicted RBP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 DNM1Q05193 864 aaKnown RBP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 MGAT3Q09327 533 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 TBC1D8BQ0IIM8 1120 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 SPECC1Q5M775 1068 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 USP49Q70CQ1 688 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 OTUD6AQ7L8S5 288 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 SNX29Q8TEQ0 813 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 ZNF668Q96K58 619 aaPredicted RBP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 PNMA5Q96PV4 448 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 PPP1R16BQ96T49 567 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 PLIN2Q99541 437 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 RAB34Q9BZG1 259 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 BMP2KQ9NSY1 1161 aaPredicted RBP16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 KIAA1024Q9UPX6 916 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 CDY2AQ9Y6F7 541 aa16.1■□□□□ 0.17
SUPT4H1-201ENST00000225504 MYH15Q9Y2K3 1946 aa16.09■□□□□ 0.17
SUPT4H1-201ENST00000225504 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
SUPT4H1-201ENST00000225504 MRPS6P82932 125 aaKnown RBP16.09■□□□□ 0.17
SUPT4H1-201ENST00000225504 KRT79Q5XKE5 535 aa16.09■□□□□ 0.17
SUPT4H1-201ENST00000225504 KCNK18Q7Z418 384 aa16.09■□□□□ 0.17
SUPT4H1-201ENST00000225504 NME8Q8N427 588 aa16.09■□□□□ 0.17
SUPT4H1-201ENST00000225504 LINC00301Q8NCQ3 95 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms