RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 RANBP17Q9H2T7 1088 aaKnown RBP27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 KIAA1024Q9UPX6 916 aa27.34■■□□□ 1.97
RUNDC3A-201ENST00000225441 GRID2IPA4D2P6 1211 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 CETN3O15182 167 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 RNF40O75150 1001 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 NOL4O94818 638 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 CYP11B2P19099 503 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 HMGCS2P54868 508 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 NNTQ13423 1086 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 Q4G0T1 1027 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 EMBQ6PCB8 327 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 GPBP1Q86WP2 473 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 FBXO11Q86XK2 927 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 AFAP1L1Q8TED9 768 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 ANO3Q9BYT9 981 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 PCDHA1Q9Y5I3 950 aa27.33■■□□□ 1.97
RUNDC3A-201ENST00000225441 C2orf54Q08AI8 447 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 NAB2Q15742 525 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 CFAP221Q4G0U5 840 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 FRMD5Q7Z6J6 570 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 RPAP3Q9H6T3 665 aaPredicted RBP27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 ELP3Q9H9T3 547 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 BZW2Q9Y6E2 419 aaKnown RBP27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 HERC4Q5GLZ8 1057 aaPredicted RBP27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 RBM46Q8TBY0 533 aaKnown RBP27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 ZNF526Q8TF50 670 aaPredicted RBP27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 CRYGNQ8WXF5 182 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 CLMNQ96JQ2 1002 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 LSM14BQ9BX40 385 aaKnown RBP27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 PLCB1Q9NQ66 1216 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 TRAF3IP3Q9Y228 551 aa27.32■■□□□ 1.96
RUNDC3A-201ENST00000225441 CES2O00748 559 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 EPHB4P54760 987 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 SLC12A3P55017 1021 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 SLC18A3Q16572 532 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 TDRD12Q587J7 1177 aaKnown RBP27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 SH3D19Q5HYK7 790 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 SCFD1Q8WVM8 642 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 CNKSR2Q8WXI2 1034 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 FAM20AQ96MK3 541 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 TLR10Q9BXR5 811 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 FAM204AQ9H8W3 233 aa27.31■■□□□ 1.96
RUNDC3A-201ENST00000225441 PPATQ06203 517 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 KLHDC7AQ5VTJ3 777 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 ALS2CLQ60I27 953 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 ERO1BQ86YB8 467 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 PRPF38AQ8NAV1 312 aaKnown RBP27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 GLIS3Q8NEA6 775 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 SMCR8Q8TEV9 937 aaPredicted RBP27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 TMOD4Q9NZQ9 345 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 SPDYE5A6NIY4 337 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 E9PMD0 336 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 SSBP05455 408 aaKnown RBP eCLIP27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 GFPT1Q06210 699 aaPredicted RBP27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 SAMD1Q6SPF0 538 aaPredicted RBP27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 CAVIN3Q969G5 261 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 STIM2Q9P246 746 aa27.3■■□□□ 1.96
RUNDC3A-201ENST00000225441 TRAF1Q13077 416 aa27.29■■□□□ 1.96
RUNDC3A-201ENST00000225441 ADAM9Q13443 819 aa27.29■■□□□ 1.96
RUNDC3A-201ENST00000225441 LDLRAD1Q5T700 205 aa27.29■■□□□ 1.96
RUNDC3A-201ENST00000225441 ZNF408Q9H9D4 720 aa27.29■■□□□ 1.96
RUNDC3A-201ENST00000225441 RNF216Q9NWF9 866 aaPredicted RBP27.29■■□□□ 1.96
RUNDC3A-201ENST00000225441 PCDHGC5Q9Y5F6 944 aa27.29■■□□□ 1.96
RUNDC3A-201ENST00000225441 A6NNZ2 444 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 OPA1O60313 960 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 TLR2O60603 784 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 RPA1P27694 616 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 TUBB8Q3ZCM7 444 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 USH1GQ495M9 461 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 SYT2Q8N9I0 419 aaPredicted RBP27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 FBXL5Q9UKA1 691 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 PPP1R9AQ9ULJ8 1098 aa27.28■■□□□ 1.96
RUNDC3A-201ENST00000225441 GOLGA6BA6NDN3 693 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 FLOT1O75955 427 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 KRT18P05783 430 aaKnown RBP27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 CIITAP33076 1130 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 POLR2FP61218 127 aaKnown RBP27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 ASIC2Q16515 512 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 BMT2Q1RMZ1 405 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 NFRKBQ6P4R8 1299 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 CCDC174Q6PII3 467 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 ETNPPLQ8TBG4 499 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 OTUD5Q96G74 571 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 LRRC1Q9BTT6 524 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 GANQ9H2C0 597 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 METTL14Q9HCE5 456 aaKnown RBP27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 DNM3Q9UQ16 869 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 POTEB3A0JP26 581 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 GOLGA8KD6RF30 607 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 PDXKO00764 312 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 CALUO43852 315 aaPredicted RBP27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 ARHGAP4P98171 946 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 IFI16Q16666 785 aaKnown RBP27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 POTEBQ6S5H4 581 aa27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.27■■□□□ 1.96
RUNDC3A-201ENST00000225441 MEIS2O14770 477 aa27.26■■□□□ 1.95
RUNDC3A-201ENST00000225441 EPB41P11171 864 aaKnown RBP27.26■■□□□ 1.95
RUNDC3A-201ENST00000225441 EPM2AIP1Q7L775 607 aaPredicted RBP27.26■■□□□ 1.95
RUNDC3A-201ENST00000225441 IFT20Q8IY31 132 aa27.26■■□□□ 1.95
RUNDC3A-201ENST00000225441 NLRC4Q9NPP4 1024 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms