RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 H2AFVQ71UI9 128 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
CACTIN-201ENST00000221899 SIX2Q9NPC8 291 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 OSGEPQ9NPF4 335 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 CLSTN1O94985 981 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 GCNT3O95395 438 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 NR3C1P04150 777 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 CYFIP2Q96F07 1278 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 TRIM51Q9BSJ1 452 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 NOVA2Q9UNW9 492 aaKnown RBP20.18■□□□□ 0.82
CACTIN-201ENST00000221899 DNM3Q9UQ16 869 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 PITPNM2Q9BZ72 1349 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 TBC1D22AQ8WUA7 517 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 USP40Q9NVE5 1235 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 CNOT8Q9UFF9 292 aaKnown RBP20.17■□□□□ 0.82
CACTIN-201ENST00000221899 NR2E1Q9Y466 385 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 CALUO43852 315 aaPredicted RBP20.17■□□□□ 0.82
CACTIN-201ENST00000221899 FSBPO95073 299 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 SPATA31C1P0DKV0 1188 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 COPB2P35606 906 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 SPIRE1Q08AE8 756 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 PRPF4BQ13523 1007 aaKnown RBP20.17■□□□□ 0.82
CACTIN-201ENST00000221899 SLC30A10Q6XR72 485 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 SPATS2Q86XZ4 545 aaKnown RBP20.17■□□□□ 0.82
CACTIN-201ENST00000221899 SLC35C1Q96A29 364 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 ASTN1O14525 1302 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 ATXN2Q99700 1313 aaKnown RBP20.17■□□□□ 0.82
CACTIN-201ENST00000221899 ABCB4P21439 1286 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 ARHGAP4P98171 946 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 NT5DC3Q86UY8 548 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 C1orf131Q8NDD1 294 aaKnown RBP20.17■□□□□ 0.82
CACTIN-201ENST00000221899 CALR3Q96L12 384 aaKnown RBP20.17■□□□□ 0.82
CACTIN-201ENST00000221899 RUSC1Q9BVN2 902 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 BHMT2Q9H2M3 363 aa20.17■□□□□ 0.82
CACTIN-201ENST00000221899 GALCP54803 685 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 DHX9Q08211 1270 aaKnown RBP20.16■□□□□ 0.82
CACTIN-201ENST00000221899 QPCTQ16769 361 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 USH1GQ495M9 461 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 FAM196AQ6ZSG2 479 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 VPS36Q86VN1 386 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 ARFGAP2Q8N6H7 521 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 SWAP70Q9UH65 585 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 ATAD5Q96QE3 1844 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 FGGP02679 453 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 PRKCIP41743 596 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 EPM2AIP1Q7L775 607 aaPredicted RBP20.16■□□□□ 0.82
CACTIN-201ENST00000221899 GLYCTKQ8IVS8 523 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 SLFN12Q8IYM2 578 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 ETNPPLQ8TBG4 499 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■■■■■ 56.2
CACTIN-201ENST00000221899 SLC12A6Q9UHW9 1150 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 STXBP5LQ9Y2K9 1186 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 ZNF831Q5JPB2 1677 aa20.16■□□□□ 0.82
CACTIN-201ENST00000221899 MEIS2O14770 477 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 POLD1P28340 1107 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 JAM2P57087 298 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 MAGOHP61326 146 aaKnown RBP20.15■□□□□ 0.82
CACTIN-201ENST00000221899 KRT71Q3SY84 523 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 SYT2Q8N9I0 419 aaPredicted RBP20.15■□□□□ 0.82
CACTIN-201ENST00000221899 LNX1Q8TBB1 728 aaPredicted RBP20.15■□□□□ 0.82
CACTIN-201ENST00000221899 MAGOHBQ96A72 148 aaKnown RBP20.15■□□□□ 0.82
CACTIN-201ENST00000221899 CABS1Q96KC9 395 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 NAP1L4Q99733 375 aaKnown RBP20.15■□□□□ 0.82
CACTIN-201ENST00000221899 GMNCA6NCL1 334 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 PDXKO00764 312 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 TMC3Q7Z5M5 1100 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 KSR1Q8IVT5 923 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 PAGR1Q9BTK6 254 aa20.15■□□□□ 0.82
CACTIN-201ENST00000221899 SUCLA2Q9P2R7 463 aaPredicted RBP20.15■□□□□ 0.82
CACTIN-201ENST00000221899 FAM86B1E9PN63 330 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 CCDC188H7C350 402 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 EVI5O60447 810 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 BUB1BO60566 1050 aaPredicted RBP20.14■□□□□ 0.82
CACTIN-201ENST00000221899 FAM86B2P0C5J1 330 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 RUFY4Q6ZNE9 571 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 ERMNQ8TAM6 284 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 LMBR1Q8WVP7 490 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 TYW1Q9NV66 732 aaKnown RBP20.14■□□□□ 0.82
CACTIN-201ENST00000221899 DDX20Q9UHI6 824 aaKnown RBP20.14■□□□□ 0.82
CACTIN-201ENST00000221899 NENFQ9UMX5 172 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 ATP8A1Q9Y2Q0 1164 aa20.14■□□□□ 0.82
CACTIN-201ENST00000221899 AHDC1Q5TGY3 1603 aaPredicted RBP20.14■□□□□ 0.81
CACTIN-201ENST00000221899 TBCAO75347 108 aaKnown RBP20.14■□□□□ 0.81
CACTIN-201ENST00000221899 NFIAQ12857 509 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 SLFN11Q7Z7L1 901 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 ZFPM1Q8IX07 1006 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 CCDC13Q8IYE1 715 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 RASGEF1CQ8N431 466 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 CCDC26Q8TAB7 109 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 CYP2W1Q8TAV3 490 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 RGL1Q9NZL6 768 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 AMFRQ9UKV5 643 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 PPP1R9AQ9ULJ8 1098 aa20.14■□□□□ 0.81
CACTIN-201ENST00000221899 IGSF9BQ9UPX0 1349 aa20.13■□□□□ 0.81
CACTIN-201ENST00000221899 RPA1P27694 616 aa20.13■□□□□ 0.81
CACTIN-201ENST00000221899 CACNB3P54284 484 aa20.13■□□□□ 0.81
CACTIN-201ENST00000221899 PPP2R2AP63151 447 aa20.13■□□□□ 0.81
CACTIN-201ENST00000221899 SPRED3Q2MJR0 410 aa20.13■□□□□ 0.81
CACTIN-201ENST00000221899 EIF1ADQ8N9N8 165 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms