RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CNOT10Q9H9A5 744 aaKnown RBP17.4■□□□□ 0.38
SF3A2-201ENST00000221494 DONSONQ9NYP3 566 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 E7EVH7 732 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 SLURP2P0DP57 97 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 HSD17B3P37058 310 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 NAPAP54920 295 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 TNIP1Q15025 636 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 CENPTQ96BT3 561 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 TMEM47Q9BQJ4 181 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 DNAJC18Q9H819 358 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 PI4KBQ9UBF8 816 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 UTRNP46939 3433 aa17.39■□□□□ 0.38
SF3A2-201ENST00000221494 SRCAPQ6ZRS2 3230 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 TLR2O60603 784 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 NOL4O94818 638 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 AKR1B1P15121 316 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 KLRC1P26715 233 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 TECP42680 631 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 EIF3BP55884 814 aaKnown RBP17.39■□□□□ 0.37
SF3A2-201ENST00000221494 SLC35G1Q2M3R5 365 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 RNF187Q5TA31 235 aaPredicted RBP17.39■□□□□ 0.37
SF3A2-201ENST00000221494 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 GPATCH11Q8N954 259 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 SEC14L1Q92503 715 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 ZKSCAN4Q969J2 545 aaPredicted RBP17.39■□□□□ 0.37
SF3A2-201ENST00000221494 CEP95Q96GE4 821 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 ZBED3Q96IU2 234 aaPredicted RBP17.39■□□□□ 0.37
SF3A2-201ENST00000221494 PNMA5Q96PV4 448 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
SF3A2-201ENST00000221494 RABEP2Q9H5N1 569 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 PSME4Q14997 1843 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 FZD9O00144 591 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 ECHS1P30084 290 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 GUCY2FP51841 1108 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 PPP2R2AP63151 447 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 IFT88Q13099 833 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 ASIC2Q16515 512 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 PPP2R5EQ16537 467 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 NBPF9Q3BBW0 867 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 TRIM59Q8IWR1 403 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 LMBR1Q8WVP7 490 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 HINFPQ9BQA5 517 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 SLC40A1Q9NP59 571 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 ZNF70Q9UC06 446 aaPredicted RBP17.39■□□□□ 0.37
SF3A2-201ENST00000221494 MCM8Q9UJA3 840 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 INTUQ9ULD6 942 aa17.39■□□□□ 0.37
SF3A2-201ENST00000221494 ATRNL1Q5VV63 1379 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 A0A0A6YYK5 440 aaPredicted RBP17.38■□□□□ 0.37
SF3A2-201ENST00000221494 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 PGRMC1O00264 195 aaKnown RBP17.38■□□□□ 0.37
SF3A2-201ENST00000221494 KIF4AO95239 1232 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 SNCBQ16143 134 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 CALCRLQ16602 461 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 KIAA0753Q2KHM9 967 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 SPDYE2Q495Y8 402 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 REXO1Q8N1G1 1221 aaKnown RBP17.38■□□□□ 0.37
SF3A2-201ENST00000221494 GIMAP7Q8NHV1 300 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 EEF2KMTQ96G04 330 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 SGSM3Q96HU1 749 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 TANGO6Q9C0B7 1094 aa17.38■□□□□ 0.37
SF3A2-201ENST00000221494 ESYT3A0FGR9 886 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 CLRN2A0PK11 232 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 SMCO2A6NFE2 343 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 MAFGO15525 162 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 FTCDO95954 541 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 SLC8A1P32418 973 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 ZNF844Q08AG5 666 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 KLHL30Q0D2K2 578 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 KRT79Q5XKE5 535 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 CACNA2D3Q8IZS8 1091 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 LSM14BQ9BX40 385 aaKnown RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 KDM4CQ9H3R0 1056 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 FAM114A2Q9NRY5 505 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 MTMR4Q9NYA4 1195 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 ZSCAN5CA6NGD5 496 aaPredicted RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 KLRF2D3W0D1 207 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 DNAJC8O75937 253 aaPredicted RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 NPEPPSP55786 919 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 MRPS25P82663 173 aaKnown RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 XRCC4Q13426 336 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 HLTFQ14527 1009 aaKnown RBP eCLIP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 CLUL1Q15846 466 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 CROCCP2Q86T23 111 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 RASGEF1CQ8N431 466 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 TBC1D5Q92609 795 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 CCDC114Q96M63 670 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.37■□□□□ 0.379e-8■■■□□ 14.6
SF3A2-201ENST00000221494 TMOD2Q9NZR1 351 aa17.37■□□□□ 0.37
SF3A2-201ENST00000221494 DDX20Q9UHI6 824 aaKnown RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 TTC7AQ9ULT0 858 aaPredicted RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 DIS3Q9Y2L1 958 aaKnown RBP17.37■□□□□ 0.37
SF3A2-201ENST00000221494 TCP10L2B9ZVM9 353 aa17.36■□□□□ 0.37
SF3A2-201ENST00000221494 GFPT2O94808 682 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms