RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SLC44A5Q8NCS7 719 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 TMEM106CQ9BVX2 250 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 ABCF3Q9NUQ8 709 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 NNMTP40261 264 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 NECTIN1Q15223 517 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 MOSPD1Q9UJG1 213 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 SKIV2LQ15477 1246 aaKnown RBP20.38■□□□□ 0.85
SMPD3-201ENST00000219334 RHPN2Q8IUC4 686 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 BAIAP2L1Q9UHR4 511 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 CPDO75976 1380 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 ABCA8O94911 1581 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 SLC10A5Q5PT55 438 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 UNC13DQ70J99 1090 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 TMEM35BQ8NCS4 154 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 CFAP61Q8NHU2 1237 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 GDAQ9Y2T3 454 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 KIF3CO14782 793 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 P4HBP07237 508 aaKnown RBP20.37■□□□□ 0.85
SMPD3-201ENST00000219334 ZNF394Q53GI3 561 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 SWSAP1Q6NVH7 229 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 MXD3Q9BW11 206 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 RNF14Q9UBS8 474 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 QARSP47897 775 aaKnown RBP20.37■□□□□ 0.85
SMPD3-201ENST00000219334 SLC12A1Q13621 1099 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 ZNRF3Q9ULT6 936 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 NVLO15381 856 aaKnown RBP20.37■□□□□ 0.85
SMPD3-201ENST00000219334 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 SPOPLQ6IQ16 392 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 GBP7Q8N8V2 638 aaPredicted RBP20.37■□□□□ 0.85
SMPD3-201ENST00000219334 DHX38Q92620 1227 aaKnown RBP20.37■□□□□ 0.85
SMPD3-201ENST00000219334 GABBR1Q9UBS5 961 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 GPC3P51654 580 aa20.37■□□□□ 0.85
SMPD3-201ENST00000219334 SAMSN1Q9NSI8 373 aaKnown RBP20.37■□□□□ 0.85
SMPD3-201ENST00000219334 TOGARAM2Q6ZUX3 1019 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 VPS39Q96JC1 886 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 ZWILCHQ9H900 591 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 HPCAL4Q9UM19 191 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 CDC25BP30305 580 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 CPVLQ9H3G5 476 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 FTCDO95954 541 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 HSPH1Q92598 858 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 HINFPQ9BQA5 517 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 SUGT1Q9Y2Z0 365 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 POTEMA6NI47 508 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 NEMP1O14524 444 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 MT-ND3P03897 115 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 TCP11X2Q5H9J9 407 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 PPP6R3Q5H9R7 873 aaPredicted RBP20.36■□□□□ 0.85
SMPD3-201ENST00000219334 TBC1D10CQ8IV04 446 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 DYDC2Q96IM9 177 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 MID2Q9UJV3 735 aa20.36■□□□□ 0.85
SMPD3-201ENST00000219334 COG7P83436 770 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 CUL4AQ13619 759 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 NHEJ1Q9H9Q4 299 aaPredicted RBP20.35■□□□□ 0.85
SMPD3-201ENST00000219334 INTS9Q9NV88 658 aaKnown RBP20.35■□□□□ 0.85
SMPD3-201ENST00000219334 ADAM22Q9P0K1 906 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 BAG2O95816 211 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 SFR1Q86XK3 245 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 RHOT2Q8IXI1 618 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 MTIF3Q9H2K0 278 aaKnown RBP20.35■□□□□ 0.85
SMPD3-201ENST00000219334 SLC16A4O15374 487 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 ALKBH5Q6P6C2 394 aaKnown RBP20.35■□□□□ 0.85
SMPD3-201ENST00000219334 CAPS2Q9BXY5 557 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 EPB41L5Q9HCM4 733 aa20.35■□□□□ 0.85
SMPD3-201ENST00000219334 CHRNA5P30532 468 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 BBS9Q3SYG4 887 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 PDIK1LQ8N165 341 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 CERKQ8TCT0 537 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 NEDD4P46934 1319 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 GRM4Q14833 912 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 TAF1CQ15572 869 aaPredicted RBP20.34■□□□□ 0.85
SMPD3-201ENST00000219334 QRICH1Q2TAL8 776 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 C11orf57Q6ZUT1 292 aaPredicted RBP20.34■□□□□ 0.85
SMPD3-201ENST00000219334 FAM213AQ9BRX8 229 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 ISCA1Q9BUE6 129 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 RPAP3Q9H6T3 665 aaPredicted RBP20.34■□□□□ 0.85
SMPD3-201ENST00000219334 CRB1P82279 1406 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 HMGCS2P54868 508 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 RWDD2BP57060 319 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 PSMC5P62195 406 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 RESTQ13127 1097 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 KCNV1Q6PIU1 500 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 MICALL2Q8IY33 904 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
SMPD3-201ENST00000219334 TTI1O43156 1089 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 KLC3Q6P597 504 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 MED4Q9NPJ6 270 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 DNAJC12Q9UKB3 198 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 MAGI3Q5TCQ9 1506 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 MOCS3O95396 460 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 RFC1P35251 1148 aaPredicted RBP20.33■□□□□ 0.85
SMPD3-201ENST00000219334 GABPB1Q06547 395 aaPredicted RBP20.33■□□□□ 0.85
SMPD3-201ENST00000219334 ENAHQ8N8S7 591 aaPredicted RBP20.33■□□□□ 0.85
SMPD3-201ENST00000219334 MMTAG2Q9BU76 263 aaKnown RBP20.33■□□□□ 0.85
SMPD3-201ENST00000219334 ELP3Q9H9T3 547 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 ATP8A1Q9Y2Q0 1164 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 RCAN1P53805 252 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 TMED2Q15363 201 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 CHAMP1Q96JM3 812 aa20.33■□□□□ 0.85
SMPD3-201ENST00000219334 MRPL4Q9BYD3 311 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms