RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ANO5Q75V66 913 aa14.69□□□□□ -0.06
TIMP1-201ENST00000218388 SESTD1Q86VW0 696 aa14.69□□□□□ -0.06
TIMP1-201ENST00000218388 PIGOQ8TEQ8 1089 aa14.69□□□□□ -0.06
TIMP1-201ENST00000218388 PLIN2Q99541 437 aa14.69□□□□□ -0.06
TIMP1-201ENST00000218388 JPH2Q9BR39 696 aaPredicted RBP14.69□□□□□ -0.06
TIMP1-201ENST00000218388 SENP6Q9GZR1 1112 aaPredicted RBP14.69□□□□□ -0.06
TIMP1-201ENST00000218388 MAGEF1Q9HAY2 307 aa14.69□□□□□ -0.06
TIMP1-201ENST00000218388 CYP26B1Q9NR63 512 aa14.69□□□□□ -0.06
TIMP1-201ENST00000218388 HPSEQ9Y251 543 aa14.69□□□□□ -0.06
TIMP1-201ENST00000218388 C17orf102A2RUQ5 167 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 CCDC85CA6NKD9 419 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 E9PMD0 336 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 POLR2DO15514 142 aaKnown RBP14.68□□□□□ -0.06
TIMP1-201ENST00000218388 COL6A1P12109 1028 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 INSRRP14616 1297 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 EN2P19622 333 aaPredicted RBP14.68□□□□□ -0.06
TIMP1-201ENST00000218388 RARRES1P49788 294 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
TIMP1-201ENST00000218388 FAM160A1Q05DH4 1040 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 TBC1D8BQ0IIM8 1120 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 GRIK4Q16099 956 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 MTERF2Q49AM1 385 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 CEP57L1Q8IYX8 460 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 LARP4BQ92615 738 aaKnown RBP14.68□□□□□ -0.06
TIMP1-201ENST00000218388 RAD54LQ92698 747 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 DHX58Q96C10 678 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 PAWRQ96IZ0 340 aaKnown RBP14.68□□□□□ -0.06
TIMP1-201ENST00000218388 PANK2Q9BZ23 570 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 BHMT2Q9H2M3 363 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 HDAC6Q9UBN7 1215 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 GTF2IRD1Q9UHL9 959 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 CENPFP49454 3210 aa14.68□□□□□ -0.06
TIMP1-201ENST00000218388 ARVCFO00192 962 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 MAGEB2O15479 319 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 GADD45BO75293 160 aaPredicted RBP14.67□□□□□ -0.06
TIMP1-201ENST00000218388 DGAT1O75907 488 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 STBD1O95210 358 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 SSBP05455 408 aaKnown RBP eCLIP14.67□□□□□ -0.06
TIMP1-201ENST00000218388 PLA2G4BP0C869 781 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 RFC5P40937 340 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 NDUFA8P51970 172 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 IGBP1P78318 339 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 SV2BQ7L1I2 683 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 RETREG2Q8NC44 543 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 DIS3LQ8TF46 1054 aaKnown RBP14.67□□□□□ -0.06
TIMP1-201ENST00000218388 LMBR1Q8WVP7 490 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 SLC7A3Q8WY07 619 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 LRRC27Q9C0I9 530 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 GOLPH3LQ9H4A5 285 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 LMBRD1Q9NUN5 540 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 KCND2Q9NZV8 630 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 TUBE1Q9UJT0 475 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 NOD1Q9Y239 953 aa14.67□□□□□ -0.06
TIMP1-201ENST00000218388 A0A087X0B3 334 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
TIMP1-201ENST00000218388 GAS2O43903 313 aaKnown RBP14.66□□□□□ -0.06
TIMP1-201ENST00000218388 RPLP2P05387 115 aaKnown RBP14.66□□□□□ -0.06
TIMP1-201ENST00000218388 MCM4P33991 863 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 POLGP54098 1239 aaPredicted RBP14.66□□□□□ -0.06
TIMP1-201ENST00000218388 NPEPPSP55786 919 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 AMPD3Q01432 767 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 TARBP2Q15633 366 aaKnown RBP14.66□□□□□ -0.06
TIMP1-201ENST00000218388 E2F4Q16254 413 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 C1orf53Q5VUE5 145 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 SLC39A5Q6ZMH5 540 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 KCNK18Q7Z418 384 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 SYT2Q8N9I0 419 aaPredicted RBP14.66□□□□□ -0.06
TIMP1-201ENST00000218388 SLC43A3Q8NBI5 491 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 ATP6V0A4Q9HBG4 840 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 BMP2KQ9NSY1 1161 aaPredicted RBP14.66□□□□□ -0.06
TIMP1-201ENST00000218388 BLOC1S4Q9NUP1 217 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 SETD4Q9NVD3 440 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 GRIN2DO15399 1336 aa14.66□□□□□ -0.06
TIMP1-201ENST00000218388 TMEM150BA6NC51 233 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 ZBTB39O15060 712 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 KINO60870 393 aaKnown RBP14.65□□□□□ -0.06
TIMP1-201ENST00000218388 ZNF202O95125 648 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 MBD3O95983 291 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 SLFN14P0C7P3 912 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 TMOD1P28289 359 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 HOXC8P31273 242 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 DNM2P50570 870 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
TIMP1-201ENST00000218388 SOX10P56693 466 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 MCM6Q14566 821 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 NAALADL2Q58DX5 795 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 KANK3Q6NY19 840 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 PADI6Q6TGC4 694 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 MTHFD1LQ6UB35 978 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 CNNM3Q8NE01 707 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 MCPH1Q8NEM0 835 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 TCP11Q8WWU5 503 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 MTRQ99707 1265 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 TIPINQ9BVW5 301 aa14.65□□□□□ -0.06
TIMP1-201ENST00000218388 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
TIMP1-201ENST00000218388 A0A087WWV3 80 aa14.64□□□□□ -0.07
TIMP1-201ENST00000218388 MBLAC1A4D2B0 266 aaPredicted RBP14.64□□□□□ -0.07
TIMP1-201ENST00000218388 ZBTB42B2RXF5 422 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms