RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 SYTL3Q4VX76 610 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 ANKS3Q6ZW76 656 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.23■□□□□ 0.67
CDK13-201ENST00000181839 SERPINB13Q9UIV8 391 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 MTMR1Q13613 665 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 SDE2Q6IQ49 451 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 RRM2BQ7LG56 351 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 RASSF3Q86WH2 238 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 ABTB1Q969K4 478 aaPredicted RBP19.23■□□□□ 0.67
CDK13-201ENST00000181839 GPC3P51654 580 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 GTF2H3Q13889 308 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 RASIP1Q5U651 963 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 SMYD3Q9H7B4 428 aa19.23■□□□□ 0.67
CDK13-201ENST00000181839 TNPO2O14787 897 aaKnown RBP19.22■□□□□ 0.67
CDK13-201ENST00000181839 DCUN1D1Q96GG9 259 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 TRAF3IP3Q9Y228 551 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 FTCDO95954 541 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 ELP3Q9H9T3 547 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 HSPA4LO95757 839 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 NDUFA8P51970 172 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 WHAMMP3Q1A5X7 153 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 ZNF699Q32M78 642 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 GPATCH4Q5T3I0 446 aaKnown RBP19.22■□□□□ 0.67
CDK13-201ENST00000181839 MARCH10Q8NA82 808 aaPredicted RBP19.22■□□□□ 0.67
CDK13-201ENST00000181839 PRKAB2O43741 272 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 WDR11Q9BZH6 1224 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 KANSL2Q9H9L4 492 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 PARVGQ9HBI0 331 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 SOS2Q07890 1332 aaPredicted RBP19.22■□□□□ 0.67
CDK13-201ENST00000181839 LRRC53A6NM62 1247 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 PTH1RQ03431 593 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 TMEM206Q9H813 350 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 TRIM45Q9H8W5 580 aaPredicted RBP19.22■□□□□ 0.67
CDK13-201ENST00000181839 ZBTB40Q9NUA8 1239 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 MAP3K20Q9NYL2 800 aaKnown RBP19.22■□□□□ 0.67
CDK13-201ENST00000181839 EPB42P16452 691 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 PAPOLAP51003 745 aaKnown RBP19.22■□□□□ 0.67
CDK13-201ENST00000181839 CHMP1BQ7LBR1 199 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 ARHGAP18Q8N392 663 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 BEST2Q8NFU1 509 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 TCP11Q8WWU5 503 aa19.22■□□□□ 0.67
CDK13-201ENST00000181839 ABCC4O15439 1325 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 CLDN3O15551 220 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 TJAP1Q5JTD0 557 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 CCDC17Q96LX7 622 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 AP1M1Q9BXS5 423 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 CCDC90BQ9GZT6 254 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 MRPL47Q9HD33 250 aaKnown RBP19.21■□□□□ 0.67
CDK13-201ENST00000181839 APOA4P06727 396 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 GAP43P17677 238 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 SYNE4Q8N205 404 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 AGR3Q8TD06 166 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 RMDN3Q96TC7 470 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 HSPA8P11142 646 aaKnown RBP19.21■□□□□ 0.67
CDK13-201ENST00000181839 GSPT1P15170 499 aaKnown RBP19.21■□□□□ 0.67
CDK13-201ENST00000181839 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
CDK13-201ENST00000181839 TAF1BQ53T94 588 aaPredicted RBP19.21■□□□□ 0.67
CDK13-201ENST00000181839 INTS9Q9NV88 658 aaKnown RBP19.21■□□□□ 0.67
CDK13-201ENST00000181839 FANCLQ9NW38 375 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 DUOX2Q9NRD8 1548 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 PKN3Q6P5Z2 889 aa19.21■□□□□ 0.67
CDK13-201ENST00000181839 FCER1AP12319 257 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 TUBGCP2Q9BSJ2 902 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
CDK13-201ENST00000181839 TRIM11Q96F44 468 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 ZC4H2Q9NQZ6 224 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 TJP2Q9UDY2 1190 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 ECE2O60344 883 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
CDK13-201ENST00000181839 ARMC6Q6NXE6 501 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 PYROXD1Q8WU10 500 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 SUN2Q9UH99 717 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 CYBBP04839 570 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 TMED1Q13445 227 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 ZFP42Q96MM3 310 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 SEPT5Q99719 369 aaPredicted RBP19.2■□□□□ 0.66
CDK13-201ENST00000181839 MAN1C1Q9NR34 630 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 SGSM2O43147 1006 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 SYCP2LQ5T4T6 812 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 CATSPER3Q86XQ3 398 aa19.2■□□□□ 0.66
CDK13-201ENST00000181839 GPBP1L1Q9HC44 474 aaPredicted RBP19.2■□□□□ 0.66
CDK13-201ENST00000181839 EFCAB14O75071 495 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 ECEL1O95672 775 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 TESK2Q96S53 571 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 FGFR1OP2Q9NVK5 253 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 MAP4P27816 1152 aaKnown RBP19.19■□□□□ 0.66
CDK13-201ENST00000181839 ZNF667Q5HYK9 610 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 SPDYAQ5MJ70 313 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 SCAF8Q9UPN6 1271 aaKnown RBP19.19■□□□□ 0.66
CDK13-201ENST00000181839 ZNF518AQ6AHZ1 1483 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 PPP1R14AQ96A00 147 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 EFHD1Q9BUP0 239 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 MUC3BQ9H195 1237 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 PHKA2P46019 1235 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 NAF1Q96HR8 494 aaKnown RBP19.19■□□□□ 0.66
CDK13-201ENST00000181839 LONP1P36776 959 aaKnown RBP19.19■□□□□ 0.66
CDK13-201ENST00000181839 TTLL4Q14679 1199 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 DDIASQ8IXT1 998 aa19.19■□□□□ 0.66
CDK13-201ENST00000181839 FAM213AQ9BRX8 229 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms