RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 GRIK5Q16478 980 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 LMBR1Q8WVP7 490 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 GANQ9H2C0 597 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 FAM114A2Q9NRY5 505 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 BSDC1Q9NW68 430 aaPredicted RBP21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 FOXO6A8MYZ6 492 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 CCDC188H7C350 402 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 XRCC5P13010 732 aaKnown RBP21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 PMS2P54278 862 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 GALCP54803 685 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 SBK1Q52WX2 424 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 KCNV2Q8TDN2 545 aa21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 DNAJC17Q9NVM6 304 aaKnown RBP21.82■■□□□ 1.08
PPP1R3F-201ENST00000055335 PLA2G4BP0C869 781 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 RASA1P20936 1047 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 SLC16A2P36021 539 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 INTS5Q6P9B9 1019 aaKnown RBP21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 LRRC57Q8N9N7 239 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 NEK9Q8TD19 979 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 FAM167BQ9BTA0 163 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 SEMA4AQ9H3S1 761 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 KCNK9Q9NPC2 374 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 ANKIB1Q9P2G1 1089 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 PPP1R9AQ9ULJ8 1098 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 CICQ96RK0 1608 aaPredicted RBP21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 A8MUI8 341 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 PABPC4Q13310 644 aaKnown RBP eCLIP21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 ARMC9Q7Z3E5 817 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 KDM4CQ9H3R0 1056 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 AJAP1Q9UKB5 411 aaPredicted RBP21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 SFI1A8K8P3 1242 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 MGRN1O60291 552 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 PSMD2Q13200 908 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 TRPM8Q7Z2W7 1104 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 C1orf131Q8NDD1 294 aaKnown RBP21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 AGAP11Q8TF27 550 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 LRRC27Q9C0I9 530 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 IKZF4Q9H2S9 585 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 BCAS3Q9H6U6 928 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 ERVK-5Q9HDB9 667 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 AGAP1Q9UPQ3 857 aa21.81■■□□□ 1.08
PPP1R3F-201ENST00000055335 ABCB11O95342 1321 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 PPIP5K2O43314 1243 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 UBOX5O94941 541 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 RPS8P62241 208 aaKnown RBP21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 ZCWPW2Q504Y3 356 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 CNOT10Q9H9A5 744 aaKnown RBP21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 ATP6V0A4Q9HBG4 840 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 GCNT4Q9P109 453 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 COL5A2P05997 1499 aaPredicted RBP21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 POTEFA5A3E0 1075 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 POTEIP0CG38 1075 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 POTEGQ6S5H5 508 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 POTEEQ6S8J3 1075 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 FBXO33Q7Z6M2 555 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 RTCBQ9Y3I0 505 aaKnown RBP21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 CASP4P49662 377 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 CRYMQ14894 314 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 ARHGAP44Q17R89 818 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 GDAP1Q8TB36 358 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 RAB17Q9H0T7 212 aa21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 THRAP3Q9Y2W1 955 aaKnown RBP21.8■■□□□ 1.08
PPP1R3F-201ENST00000055335 MYH7BA7E2Y1 1941 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 GOLGA6L10A0A0M3HER8 536 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 AFPP02771 609 aaKnown RBP21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 PON1P27169 355 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 SLC35G2Q8TBE7 412 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 FAXDC2Q96IV6 333 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 CALR3Q96L12 384 aaKnown RBP21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 C5orf60A6NFR6 353 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 GNA14O95837 355 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 PLCG2P16885 1265 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 CDK8P49336 464 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 NT5DC3Q86UY8 548 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 SPICE1Q8N0Z3 855 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 KLHL29Q96CT2 875 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 C18orf8Q96DM3 657 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 SLITRK6Q9H5Y7 841 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 COL18A1P39060 1754 aa21.79■■□□□ 1.08
PPP1R3F-201ENST00000055335 RNF25Q96BH1 459 aaPredicted RBP21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 FGFR1OP2Q9NVK5 253 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 TRIM33Q9UPN9 1127 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 MYH3P11055 1940 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 CCDC169A6NNP5 214 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 DDX3XO00571 662 aaKnown RBP eCLIP21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 DNAJC8O75937 253 aaPredicted RBP21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 MYBL1P10243 752 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 FXR2P51116 673 aaKnown RBP eCLIP21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 MRPL12P52815 198 aaKnown RBP21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 LACTB2Q53H82 288 aaPredicted RBP21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 COBLL1Q53SF7 1204 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 TRIM68Q6AZZ1 485 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 FMNL3Q8IVF7 1028 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 CEP63Q96MT8 703 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 ENO4A6NNW6 628 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 BAG3O95817 575 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 CYP4A11Q02928 519 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms