RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HACL1Q9UJ83 578 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 JRKLQ9Y4A0 524 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PCDHB13Q9Y5F0 798 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 CLIC2O15247 247 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 AKAP3O75969 853 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 EGFRP00533 1210 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 P4HBP07237 508 aaKnown RBP9.06□□□□□ -0.96
VAMP3-201ENST00000054666 ITGB5P18084 799 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 MCM3P25205 808 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 NMT1P30419 496 aaKnown RBP9.06□□□□□ -0.96
VAMP3-201ENST00000054666 HOXD13P35453 343 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 MYH11P35749 1972 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 PSMC2P35998 433 aaKnown RBP9.06□□□□□ -0.96
VAMP3-201ENST00000054666 ZNF131P52739 623 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 GFPT1Q06210 699 aaPredicted RBP9.06□□□□□ -0.96
VAMP3-201ENST00000054666 TKFCQ3LXA3 575 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 HGSNATQ68CP4 663 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 CCDC70Q6NSX1 233 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 B3GNT9Q6UX72 402 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 SAMD7Q7Z3H4 446 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 APOBEC3FQ8IUX4 373 aaKnown RBP9.06□□□□□ -0.96
VAMP3-201ENST00000054666 FAM186BQ8IYM0 893 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 SYTL5Q8TDW5 730 aaPredicted RBP9.06□□□□□ -0.96
VAMP3-201ENST00000054666 NOX5Q96PH1 765 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 MKNK1Q9BUB5 465 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.06□□□□□ -0.96
VAMP3-201ENST00000054666 LTBP3Q9NS15 1303 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 TBC1D22BQ9NU19 505 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 GCNT4Q9P109 453 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 COL20A1Q9P218 1284 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 HDAC6Q9UBN7 1215 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 ZMYM2Q9UBW7 1377 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 FRMD4BQ9Y2L6 1034 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 FHOD1Q9Y613 1164 aa9.06□□□□□ -0.96
VAMP3-201ENST00000054666 GTPBP10A4D1E9 387 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RBAK-RBAKDNI3L0D1 243 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 K7ENM7 598 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 PJA2O43164 708 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 SEC31AO94979 1220 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RHOXF2BP0C7M4 288 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 NAP1L1P55209 391 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 ARID5AQ03989 594 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 ALCAMQ13740 583 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 SCYL3Q8IZE3 742 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 SYCP3Q8IZU3 236 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 FAM133AQ8N9E0 248 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 IL31RAQ8NI17 732 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 CAPZA3Q96KX2 299 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RHOXF2Q9BQY4 288 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 ANKZF1Q9H8Y5 726 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 AGO4Q9HCK5 861 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 LARSQ9P2J5 1176 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 CNOT7Q9UIV1 285 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 UBIAD1Q9Y5Z9 338 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 BZW2Q9Y6E2 419 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 CAPN6Q9Y6Q1 641 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 DUSP10Q9Y6W6 482 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 HIP1RO75146 1068 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 MOCS3O95396 460 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 MYCLP12524 364 aaPredicted RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 UCHL3P15374 230 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 TCP1P17987 556 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 CASP4P49662 377 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RPS6P62753 249 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RASSF7Q02833 373 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 GABPB1Q06547 395 aaPredicted RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 SLC18A3Q16572 532 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 ASTE1Q2TB18 679 aaPredicted RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 MUM1L1Q5H9M0 696 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 PADI6Q6TGC4 694 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RNF207Q6ZRF8 634 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 ZNF720Q7Z2F6 126 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 VPS36Q86VN1 386 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RNF10Q8N5U6 811 aaKnown RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 DRC1Q96MC2 740 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 TRERF1Q96PN7 1200 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 MLXIPQ9HAP2 919 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 POLD4Q9HCU8 107 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 AIPL1Q9NZN9 384 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 WRAP73Q9P2S5 460 aaPredicted RBP9.05□□□□□ -0.96
VAMP3-201ENST00000054666 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 RAB21Q9UL25 225 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 SNX12Q9UMY4 172 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 HYOU1Q9Y4L1 999 aa9.05□□□□□ -0.96
VAMP3-201ENST00000054666 ZBTB39O15060 712 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 TGFB1I1O43294 461 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 TFRCP02786 760 aaKnown RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 QARSP47897 775 aaKnown RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 CYP2J2P51589 502 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 JAK3P52333 1124 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 BACE1P56817 501 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 KCNA1Q09470 495 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 SPP2Q13103 211 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 GPS2Q13227 327 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 DGKZQ13574 1117 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 PGM5Q15124 567 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ENOX2Q16206 610 aaKnown RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 LONRF2Q1L5Z9 754 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms