RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FAM13AO94988 1023 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 AARSP49588 968 aaKnown RBP eCLIP14.39□□□□□ -0.11
CTNS-201ENST00000046640 ASTE1Q2TB18 679 aaPredicted RBP14.39□□□□□ -0.11
CTNS-201ENST00000046640 ZNF772Q68DY9 489 aaPredicted RBP14.39□□□□□ -0.11
CTNS-201ENST00000046640 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 BTNL9Q6UXG8 535 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 MICALL1Q8N3F8 863 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 TTLL6Q8N841 843 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 TSEN2Q8NCE0 465 aaKnown RBP14.39□□□□□ -0.11
CTNS-201ENST00000046640 SPAG5Q96R06 1193 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 VIPAS39Q9H9C1 493 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
CTNS-201ENST00000046640 TBX3O15119 743 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 PPFIA4O75335 1185 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 NR3C1P04150 777 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 XRCC5P13010 732 aaKnown RBP14.38□□□□□ -0.11
CTNS-201ENST00000046640 KLRC1P26715 233 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 KIAA0753Q2KHM9 967 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 ARL8AQ96BM9 186 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 ALS2CR12Q96Q35 445 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 ZNF577Q9BSK1 485 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 PITPNM2Q9BZ72 1349 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 TARSL2A2RTX5 802 aaKnown RBP14.38□□□□□ -0.11
CTNS-201ENST00000046640 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
CTNS-201ENST00000046640 GNA14O95837 355 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 SERPING1P05155 500 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 DPEP1P16444 411 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 CIITAP33076 1130 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 LIG3P49916 1009 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 GNGT1P63211 74 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 LDHDQ86WU2 507 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 FAM151AQ8WW52 585 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 RUFY1Q96T51 708 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
CTNS-201ENST00000046640 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
CTNS-201ENST00000046640 FAM184BQ9ULE4 1060 aa14.38□□□□□ -0.11
CTNS-201ENST00000046640 PALMO75781 387 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 INPP5BP32019 993 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 PTK2Q05397 1052 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 TTC31Q49AM3 519 aaPredicted RBP14.37□□□□□ -0.11
CTNS-201ENST00000046640 ZNF662Q6ZS27 426 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 BCAS4Q8TDM0 211 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.37□□□□□ -0.113e-13■■■■■ 511.3
CTNS-201ENST00000046640 PPP1R1BQ9UD71 204 aaPredicted RBP14.37□□□□□ -0.11
CTNS-201ENST00000046640 ASTN1O14525 1302 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 CNTNAP1P78357 1384 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 ZEB2O60315 1214 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 EYA4O95677 639 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 MMP14P50281 582 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 CYP2J2P51589 502 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 IRAK1P51617 712 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 ASIC2Q16515 512 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 EXOC3L4Q17RC7 722 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 IQCEQ6IPM2 695 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 MSL3Q8N5Y2 521 aaKnown RBP14.37□□□□□ -0.11
CTNS-201ENST00000046640 SUPT20HQ8NEM7 779 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 RPGRIP1Q96KN7 1286 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 NOX5Q96PH1 765 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 ZNF341Q9BYN7 854 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 C10orf71Q711Q0 1435 aa14.37□□□□□ -0.11
CTNS-201ENST00000046640 ANO9A1A5B4 782 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 EGFRP00533 1210 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 KRT14P02533 472 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 UCHL3P15374 230 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
CTNS-201ENST00000046640 EDRF1Q3B7T1 1238 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 AENQ8WTP8 325 aaKnown RBP14.36□□□□□ -0.11
CTNS-201ENST00000046640 IQCDQ96DY2 449 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 TLR10Q9BXR5 811 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 GANQ9H2C0 597 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 VCPKMTQ9H867 229 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 TMEM150BA6NC51 233 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 NFIBO00712 420 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 CALUO43852 315 aaPredicted RBP14.36□□□□□ -0.11
CTNS-201ENST00000046640 RPS6KA5O75582 802 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 PSMD10O75832 226 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 LCA5LO95447 670 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 AFPP02771 609 aaKnown RBP14.36□□□□□ -0.11
CTNS-201ENST00000046640 PON1P27169 355 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 PAFAH1B1P43034 410 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 MAGEA9P43362 315 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 TRADDQ15628 312 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 KLHDC7AQ5VTJ3 777 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 C8orf74Q6P047 294 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
CTNS-201ENST00000046640 CHURC1Q8WUH1 139 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 NFU1Q9UMS0 254 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 TGFB1I1O43294 461 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 PDCLQ13371 301 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 DEFB132Q7Z7B7 95 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 IL31RAQ8NI17 732 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 RBM46Q8TBY0 533 aaKnown RBP14.36□□□□□ -0.11
CTNS-201ENST00000046640 CENPHQ9H3R5 247 aa14.36□□□□□ -0.11
CTNS-201ENST00000046640 CCPG1Q9ULG6 757 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms