RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Baiap3Q80TT2 1134 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Med15Q924H2 789 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Rabgef1Q9JM13 491 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Gm28360A0A087WR25 190 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Gm3127E9Q9P5 263 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Gm3453K7N724 263 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Sh3gl1Q62419 368 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 PodnQ7TQ62 611 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Clca2Q8BG22 942 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 ErmapQ9JLN5 566 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Map3k4O08648 1597 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Fhod3Q76LL6 1578 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Kif1bQ60575 1816 aaKnown RBP18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Zdhhc9P59268 364 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Trim35Q8C006 501 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Slc12a6Q924N4 1150 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Cpsf3Q9QXK7 684 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Magi3Q9EQJ9 1476 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Zmynd8A2A484 1235 aaKnown RBP18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Atp2c2A7L9Z8 944 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Gm382B1AXN3 1250 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Vmn2r23E9PXI5 849 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Raph1F2Z3U3 1266 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Serpina1bP22599 413 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 EgfrQ01279 1210 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ccdc33Q3ULW6 985 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Lrig2Q52KR2 1054 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Sdf4Q61112 361 aa18.36■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Myo1eE9Q634 1107 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Arhgap6O54834 987 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Pla2g4eQ50L42 875 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Rpf1Q7TND5 349 aaKnown RBP18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Fsd1lQ8BYN5 507 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 PycardQ9EPB4 193 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Tnni1Q9WUZ5 187 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Prr5lA2AVJ5 370 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Sstr3P30935 428 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ulk3Q3U3Q1 472 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ccdc40Q8BI79 1192 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Setd3Q91WC0 594 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Gps1Q99LD4 471 aaKnown RBP18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Peg12Q9WVA7 283 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Fam81bA0A140LI28 432 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Mcl1P97287 331 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Upf3bQ3ULL6 472 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ankrd23Q812A3 306 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Akr1c14Q91WT7 323 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Bzw1Q9CQC6 419 aaKnown RBP18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 P2rx7Q9Z1M0 595 aa18.35■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ccdc185Q3V118 621 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Znf827Q505G8 1078 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Sh3tc2Q80VA5 1289 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Pak4Q8BTW9 593 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Sept10Q8C650 452 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Lrrc14Q8VC16 493 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ppp1r16bQ8VHQ3 568 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Iqcf1Q9D9K8 182 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Gja10Q9WUS4 505 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Usp54Q8BL06 1588 aaKnown RBP18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Hip1Q8VD75 1029 aaKnown RBP18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Orc1Q9Z1N2 840 aaKnown RBP18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Carmil3Q3UFQ8 1375 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Itih1Q61702 907 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ube2oQ6ZPJ3 1288 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Mrpl11Q9CQF0 192 aaKnown RBP18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Rims1Q99NE5 1463 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Cdc27A2A6Q5 825 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Clrn2B2RVW2 232 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ccdc138Q0VF22 680 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Rasa3Q60790 834 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Snip1Q8BIZ6 383 aaKnown RBP18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ttc26Q8BS45 554 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Klhl11Q8CE33 709 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ifnl2Q4VK74 193 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Sptlc3Q8BG54 563 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 HnmtQ91VF2 295 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Setd6Q9CWY3 473 aa18.34■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Crnkl1P63154 690 aaKnown RBP18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Trim72Q1XH17 477 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Lamc2Q61092 1191 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Hsph1Q61699 858 aaKnown RBP18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 MbipQ99LQ1 341 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Adgrf5G5E8Q8 1348 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Iqcj-Schip1A0A088MLT8 559 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Gm8994E9PV04 411 aaKnown RBP18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Schip1P0DPB4 484 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Bpifb6Q8BU51 449 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Ndufb9Q9CQJ8 179 aa18.33■□□□□ 0.53
Ptpre-207ENSMUST00000211140 Casq2O09161 415 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Pou5f1P20263 352 aaKnown RBP18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Pik3r1P26450 724 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Cav1P49817 178 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Slc12a1P55014 1095 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Skap1Q3UUV5 355 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 PtgdrP70263 357 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Slc7a1Q09143 622 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Nme8Q715T0 586 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Znf12Q7TSI0 686 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Fkbp6Q91XW8 327 aa18.33■□□□□ 0.52
Ptpre-207ENSMUST00000211140 Snf8Q9CZ28 258 aa18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms