RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Tmx2Q9D710 295 aaKnown RBP14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Large1Q9Z1M7 756 aa14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Stat4P42228 749 aa14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Otud5Q3U2S4 566 aa14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Arhgef16Q3U5C8 713 aa14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Samhd1Q60710 627 aa14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Ddx3yQ62095 658 aaKnown RBP14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Best3Q6H1V1 669 aa14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Eif3cQ8R1B4 911 aaKnown RBP14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Actn2Q9JI91 894 aa14.91□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 PhbP67778 272 aaKnown RBP14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Spdye4aQ5IBH6 268 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 TbckQ8BM85 762 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Zhx2Q8C0C0 836 aaKnown RBP14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Dr1Q91WV0 176 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Mms19Q9D071 1031 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 N4bp2F8VQG7 1678 aaKnown RBP14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 D430041D05RikF6ZGR6 1678 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Fgl2P12804 432 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Nedd4P46935 887 aaKnown RBP14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Slc26a6Q8CIW6 758 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Creb3l3Q91XE9 479 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Tmod3Q9JHJ0 352 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Nr1i3O35627 358 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Timm44O35857 452 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Dpcr1Q3TNW5 500 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Zfyve27Q3TXX3 415 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Hpcal4Q8BGZ1 191 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Amigo3Q8C2S7 508 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Tekt2Q922G7 430 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Arhgef7Q9ES28 862 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Orc3Q9JK30 715 aaKnown RBP14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Psmd10Q9Z2X2 231 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Gfpt2Q9Z2Z9 682 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Grin2dQ03391 1323 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Gm6657A0A1B0GRJ3 277 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 1700003F12RikA2AKE5 210 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Ttc38A3KMP2 465 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Orc4O88708 433 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Avpr1aQ62463 423 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 Trerf1Q8BXJ2 1205 aa14.9□□□□□ -0.02
Pcdha1-202ENSMUST00000193839 AtrnQ9WU60 1428 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Trip13Q3UA06 432 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Sh3gl3Q62421 347 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Krt12Q64291 487 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Pip5kl1Q6U7H8 395 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Slitrk3Q810B9 980 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Sipa1l1Q8C0T5 1782 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Lrrc38A2VDH3 298 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Mcl1P97287 331 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Trim72Q1XH17 477 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Tll1Q62381 1013 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Krt74Q6IFZ9 495 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Klhl29Q80T74 875 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Rab11fip4Q8BQP8 635 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 N4bp3Q8C7U1 537 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Olfr390Q8VEZ7 311 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Tubgcp6G5E8P0 1769 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Pcdh11xF6ZNL5 1338 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Gm28042B7ZCM9 1014 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 CopeO89079 308 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 MybP06876 636 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Pla2g4bP0C871 782 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Adgra1Q8C4G9 578 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 DnerQ8JZM4 737 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Spats2lQ91WJ7 558 aaKnown RBP14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Fthl17aQ9DAX0 182 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Scyl1Q9EQC5 806 aaKnown RBP14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Fmnl1Q9JL26 1094 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Cbx8Q9QXV1 362 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Nfx1B1AY10 1114 aaKnown RBP14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 FktnQ8R507 461 aa14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Fxr2Q9WVR4 673 aaKnown RBP14.89□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Gimap9G3X987 291 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Prr7Q3V0I2 269 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 SpidrQ8BGX7 933 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Tcp11l2Q8K1H7 517 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 MgarpQ8VI64 283 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Sh3bp5lQ99LH9 392 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Med7Q9CZB6 233 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Sept12Q9D451 317 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Rasgrf1P27671 1262 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Wfs1P56695 890 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Tmem39bQ810L4 492 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 H6pdQ8CFX1 789 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Psma8Q9CWH6 250 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Extl2Q9ES89 330 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Fam81bA0A140LI28 432 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 4933406M09RikG3XA12 479 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 MyocO70624 490 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Rpf1Q7TND5 349 aaKnown RBP14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 P2ry10Q8BFU7 328 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Alg3Q8K2A8 438 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 CpzQ8R4V4 654 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Pacsin2Q9WVE8 486 aaKnown RBP14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Gm3415J3QMS8 315 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Kcnh2O35219 1162 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Stk10O55098 966 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Gjb4Q02738 266 aa14.88□□□□□ -0.03
Pcdha1-202ENSMUST00000193839 Adgrb1Q3UHD1 1582 aa14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms