RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Nup160Q9Z0W3 1402 aaKnown RBP13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Sh3bp1P55194 680 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 EgfrQ01279 1210 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cdk8Q8R3L8 464 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Knl1Q66JQ7 1612 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 C87499Q3UX49 493 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ddx5Q61656 614 aaKnown RBP13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Fnbp1Q80TY0 616 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Amhr2Q8K592 568 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ccdc182Q9D9C6 152 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 CatspereP0DP43 985 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Prmt9Q3U3W5 846 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Q3UJP5 209 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Itih1Q61702 907 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ripor2Q80U16 1078 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 RabggtaQ9JHK4 567 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cul1Q9WTX6 776 aa13.38□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Trim72Q1XH17 477 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Qrich1Q3UA37 777 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tgfb1i1Q62219 461 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 PrcpQ7TMR0 491 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Appl1Q8K3H0 707 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 DtnaQ9D2N4 746 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cyp11b1Q3TG86 501 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 SpdyaQ5IBH7 310 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 E330017A01RikQ8BU47 192 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Slc25a13Q9QXX4 676 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Stk39Q9Z1W9 556 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Crlf3Q9Z2L7 442 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Plekhg1F6S200 1446 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gm8922F6XVS9 199 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 CstaP56567 97 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cops2P61202 443 aaKnown RBP13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rbm15bQ6PHZ5 887 aaKnown RBP13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Pcdhb11Q91UZ8 797 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Prpf4Q9DAW6 521 aaKnown RBP13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cbx6Q9DBY5 414 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Flot2Q60634 428 aaKnown RBP13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 CybbQ61093 570 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Sorbs1Q62417 1290 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cep104Q80V31 926 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rfx6Q8C7R7 927 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Q922C1 641 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cep85lA0A1W2P884 806 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Zmynd8A2A484 1235 aaKnown RBP13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Vav2Q60992 868 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Q9D1F3 157 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Llgl2Q3TJ91 1027 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Fbxl5Q8C2S5 690 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ano4Q8C5H1 955 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ppp1r2Q9DCL8 206 aa13.37□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tac1P41539 130 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Snap25P60879 206 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Sparcl1P70663 650 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Fam83bQ0VBM2 1012 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Mei1Q9D4I2 1268 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Myo5cE9Q1F5 1742 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ugt1a5B2RT14 529 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 GartQ64737 1010 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nlrp4eQ66X19 978 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Cd209bQ8CJ91 325 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ddx18Q8K363 660 aaKnown RBP13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Twf1Q91YR1 350 aaKnown RBP13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Abcb6Q9DC29 842 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 CltcQ68FD5 1675 aaKnown RBP13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gm28961A0A087WPA5 222 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gm21858A0A087WQ24 222 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Exosc10P56960 887 aaKnown RBP13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Znf532Q6NXK2 1036 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Gdap1l1Q8VE33 370 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 HnmtQ91VF2 295 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 PigbQ9JJQ0 542 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tcof1O08784 1320 aaKnown RBP13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Akr1b1P45376 316 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Trim62Q80V85 475 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Arhgap15Q811M1 481 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 PdhbQ9D051 359 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Rps6kb2Q9Z1M4 485 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Flt1P35969 1333 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Aox2Q5SGK3 1345 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ap1m1P35585 423 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Samsn1P57725 372 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Yipf3Q3UDR8 347 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Usp19Q3UJD6 1360 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Fhod1Q6P9Q4 1197 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Otub1Q7TQI3 271 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Uba6Q8C7R4 1053 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Alas1Q8VC19 642 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Pcdha11Q91Y19 950 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 E2f6O54917 272 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Hps5P59438 1126 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Lig3P97386 1015 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nim1kQ8BHI9 436 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Mei4Q8BRM6 389 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Tgs1Q923W1 853 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Map3k4O08648 1597 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Dsg3O35902 993 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Ect2Q07139 913 aa13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Nxf7Q80SZ6 620 aaKnown RBP13.36□□□□□ -0.27
Col6a3-208ENSMUST00000188587 Sgsm1Q8BPQ7 1093 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms