RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Clip3B9EHT4 547 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Vmn2r78K7N6U5 853 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Grem2O88273 168 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tnnc1P19123 161 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Vcam1P29533 739 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Setd4P58467 439 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ppp2r5cQ60996 524 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ift20Q61025 132 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 AlcamQ61490 583 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Krt14Q61781 484 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cep70Q6IQY5 616 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Lrig3Q6P1C6 1117 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Sez6lQ6P1D5 963 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ube2q1Q7TSS2 422 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Rassf10Q8BL43 508 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Scfd1Q8BRF7 639 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Lrit1Q8K099 624 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Znf830Q8R1N0 363 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cbwd1Q8VEH6 393 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Heatr4E9Q357 955 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Usp17lbE9Q9U0 468 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Rgs22G3UYX5 1258 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cetn3O35648 167 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 D1Pas1P16381 660 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Npr3P70180 536 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Surf6P70279 355 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Gjb6P70689 261 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ell2Q3UKU1 639 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ddx3xQ62167 662 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Mcf2lQ64096 1149 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 BcrQ6PAJ1 1270 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tmc3Q7TQ69 1130 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Vgll2Q8BGW8 322 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ift74Q8BKE9 600 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Fbxo38Q8BMI0 1194 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Gpcpd1Q8C0L9 675 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Def6Q8C2K1 630 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Rtp1Q8C8C1 263 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 TbceQ8CIV8 524 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Nop56Q9D6Z1 580 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ccdc89Q9DA73 370 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tmem174Q9DCX7 243 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cd274Q9EP73 290 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Popdc2Q9ES82 367 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Abt1Q9QYL7 269 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Plcb1Q9Z1B3 1216 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ptpn20O55082 426 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Pja1O55176 578 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Becn2P0DM65 447 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Eef2P58252 858 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Kifap3P70188 793 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Glg1Q61543 1175 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Mcm7Q61881 719 aaKnown RBP6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tm4sf1Q64302 202 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tmc4Q7TQ65 694 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Lrrc15Q80X72 579 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Pramel6Q810Y9 485 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Spice1Q8C804 860 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tbc1d10cQ8C9V1 444 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Exd1Q8CDF7 570 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ccdc87Q8CDL9 855 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Fam20aQ8CID3 541 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Irak4Q8R4K2 459 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Erp44Q9D1Q6 406 aa6.81□□□□□ -1.32
Lig4-202ENSMUST00000170033 Myh11O08638 1972 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 A0A286YCQ6 122 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cacna2d1O08532 1103 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Slc27a3O88561 667 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 XlrP05531 208 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Usp53P15975 1069 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 HmmrQ00547 794 aaKnown RBP6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Gpr162Q3UN16 588 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cracr2aQ3UP38 310 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Rc3h1Q4VGL6 1130 aaKnown RBP6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Stxbp3Q60770 592 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Glra4Q61603 456 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Sin3bQ62141 1098 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Haus6Q6NV99 933 aaKnown RBP6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 GmipQ6PGG2 971 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Rassf6Q80UQ2 353 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ece2Q80Z60 881 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Snx14Q8BHY8 964 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Psmd5Q8BJY1 504 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Igdcc3Q8BQC3 813 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 IarsQ8BU30 1262 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ccser1Q8C0C4 895 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Traf3ip3Q8C0G2 513 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Pak2Q8CIN4 524 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Klhl36Q8R124 613 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Tmcc3Q8R310 477 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Sh3kbp1Q8R550 709 aaKnown RBP6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 AacsQ9D2R0 672 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Krt20Q9D312 431 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Ccdc105Q9D4K7 499 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 ThegQ9JMB1 375 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Cul1Q9WTX6 776 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Gm7356A0A087WSA6 508 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Lrrc38A2VDH3 298 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Apol7aB2RT54 418 aa6.8□□□□□ -1.32
Lig4-202ENSMUST00000170033 Gm28042B7ZCM9 1014 aa6.8□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms