RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Scgb2b18A0A087WPA9 112 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Slc9a2Q3ZAS0 814 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Igbp1Q61249 340 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ces1eQ64176 562 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Calhm6Q8C9E8 313 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Rpap2Q8VC34 614 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Tor1aip1Q921T2 595 aaKnown RBP24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Kremen1Q99N43 473 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Josd2Q9CR30 188 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Tekt1Q9DAJ2 418 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Nudt5Q9JKX6 218 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Cntn6Q9JMB8 1028 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 AmfrQ9R049 643 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Cdc42ep5Q9Z0X0 150 aa24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Uso1Q9Z1Z0 959 aaKnown RBP24.99■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gm7086A0A1W2P766 342 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gm7168A0AUV4 508 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Wdr78E9PYY5 807 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gm10378F6XQQ1 160 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ccdc191J3QQ27 883 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Srd5a1Q68FF9 255 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Prpf40bQ80W14 870 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 D130040H23RikQ8BII3 405 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Arid5bQ8BM75 1188 aaKnown RBP24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 3830417A13RikQ8BQJ2 303 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Setdb2Q8C267 713 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ano2Q8CFW1 1002 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Vmn1r203Q8R273 311 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Eya4Q9Z191 616 aa24.98■■□□□ 1.59
Scn1b-201ENSMUST00000098548 RptorQ8K4Q0 1335 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Arhgef10lA2AWP8 1280 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ugt1a6bK9J7B2 531 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Il2rbP16297 539 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Pbx1P41778 430 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Psmc6P62334 389 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Nlrp4cQ3TKR3 982 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ugt1a6Q64435 531 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ugt1a7cQ6ZQM8 531 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Txndc5Q91W90 417 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Pcdhb12Q91Y07 789 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Pcdhac2Q91Y09 1006 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ranbp17Q99NF8 1088 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Maged1Q9QYH6 775 aaKnown RBP24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Znf568E9PYI1 671 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Guca2bO09051 106 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 RarbP22605 482 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Col9a2Q07643 688 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gpatch11Q3UFS4 262 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Crhr2Q60748 411 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 March6Q6ZQ89 909 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Jade2Q6ZQF7 829 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Nsun6Q7TS68 476 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Igdcc3Q8BQC3 813 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Rasal3Q8C2K5 1041 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Phtf2Q8CB19 747 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Vmn1r191Q8K4D0 298 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Mtmr6Q8VE11 617 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Kif17Q99PW8 1038 aa24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Knop1Q9Z2Q2 478 aaKnown RBP24.97■■□□□ 1.59
Scn1b-201ENSMUST00000098548 MtrA6H5Y3 1253 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Vmn2r79E9Q067 851 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Slc6a20bO88575 635 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ms4a1P19437 291 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Lta4hP24527 611 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Samsn1P57725 372 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 PtgdrP70263 357 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Cyp26b1Q811W2 512 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Fam20aQ8CID3 541 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ankrd54Q91WK7 299 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Tc2nQ91XT6 489 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Klhl40Q9D783 621 aa24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Xrn2Q9DBR1 951 aaKnown RBP24.96■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gm20503G3UZK1 150 aa24.95■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Ankrd40Q5SUE8 363 aa24.95■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Cracr2bQ80ZJ8 394 aa24.95■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Spata32Q8C5V0 334 aa24.95■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Cabp5Q9JLK3 173 aa24.95■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Tex21Q9R0U9 575 aa24.95■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Myh9Q8VDD5 1960 aaKnown RBP24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Gm43951A0A0N4SUT6 962 aa24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 PklrP53657 574 aa24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Herc4Q6PAV2 1057 aa24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Mtmr10Q7TPM9 771 aa24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Dennd2aQ8C4S8 1000 aa24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Q8C5C9 218 aa24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Celf3Q8CIN6 465 aa24.94■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Gm45140A0A0N4SUM8 220 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 E030030I06RikJ3QML9 246 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Bag1Q60739 355 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Fscn1Q61553 493 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 C2cd5Q7TPS5 1016 aaKnown RBP24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Sestd1Q80UK0 696 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Spdl1Q923A2 608 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 CutaQ9CQ89 177 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 AgtP11859 477 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Dnm2P39054 870 aaKnown RBP24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Tnfaip8l3Q3TBL6 204 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Lrrc55Q3UY51 311 aa24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 NkrfQ8BY02 690 aaKnown RBP24.93■■□□□ 1.58
Scn1b-201ENSMUST00000098548 Xpo5Q924C1 1204 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms