RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Ppp2r5cQ60996 524 aa16.93■□□□□ 0.3
Clcn3-203ENSMUST00000093490 SowahdQ8BY98 327 aa16.93■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Lnx1O70263 728 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Lmnb1P14733 588 aaKnown RBP16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cacnb3P54285 484 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 F13a1Q8BH61 732 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Kiaa0391Q8JZY4 584 aaKnown RBP16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Llcfc1Q9D9P8 108 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Pdzrn4E9PUZ9 1014 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Edem3Q2HXL6 931 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Meis1Q60954 390 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Ccdc65Q8VHI7 493 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Pck1Q9Z2V4 622 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Clcn6O35454 870 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 BcrQ6PAJ1 1270 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Znf12Q7TSI0 686 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Ms4a5Q810P8 197 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Svs3bQ8BZH8 265 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Dhx30Q99PU8 1217 aaKnown RBP16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Abcb1bP06795 1276 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Arl4aP61213 200 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Arid5bQ8BM75 1188 aaKnown RBP16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Rasgrp4Q8BTM9 673 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Dhx58Q99J87 678 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Usp21Q9QZL6 566 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cdc42bpbQ7TT50 1713 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Ttc13A0A1L1SSC7 844 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 ZfaP23607 742 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Lig1P37913 916 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 OsbpQ3B7Z2 805 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Lsm14bQ8CGC4 385 aaKnown RBP16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Sytl1Q99N80 567 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Psma8Q9CWH6 250 aa16.92■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cep170bQ80U49 1574 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Slc3a2P10852 526 aaKnown RBP16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 ItkQ03526 625 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Atg16l1Q8C0J2 607 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 4921524L21RikQ9D5T2 438 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Snx12O70493 165 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Hcls1P49710 486 aaKnown RBP16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Lins1Q3U1D0 764 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cnot7Q60809 285 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Nlrp4fQ66X05 959 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Dnajc8Q6NZB0 253 aaKnown RBP16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 CoasyQ9DBL7 563 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Rmdn1Q9DCV4 305 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Gadd45gQ9Z111 159 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 RpsaP14206 295 aaKnown RBP16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Tsta3P23591 321 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Palb2Q3U0P1 1104 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 EpgnQ924X1 152 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Trip6Q9Z1Y4 480 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Zfp626A0A0U1RQ84 676 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Ccdc153P0C7Q1 202 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Stat3P42227 770 aaKnown RBP16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Arhgap18Q8K0Q5 663 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Wbp11Q923D5 641 aaKnown RBP16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Rrp15Q9CYX7 281 aaKnown RBP16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Dnajc12Q9R022 198 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cog1Q9Z160 980 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Syngap1F6SEU4 1340 aa16.91■□□□□ 0.3
Clcn3-203ENSMUST00000093490 LtkP08923 888 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Casp2P29594 452 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Gpc4P51655 557 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Stx1bP61264 288 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Rassf6Q80UQ2 353 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Olfr390Q8VEZ7 311 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Abcg3Q99P81 650 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cep85lA0A1W2P884 806 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Casp8O89110 480 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Prmt9Q3U3W5 846 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Lrch2Q3UMG5 773 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Tbc1d30Q69ZT9 766 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cpsf3Q9QXK7 684 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Prkab1Q9R078 270 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 SynrgQ5SV85 1306 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Nr1i3O35627 358 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cyp11b1Q3TG86 501 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 EmsyQ8BMB0 1264 aaKnown RBP16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Vmn2r79E9Q067 851 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Ap1m1P35585 423 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cyp7b1Q60991 507 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Tmtc4Q8BG19 741 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 P3h4Q8K2B0 443 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 MsraQ9D6Y7 233 aa16.9■□□□□ 0.3
Clcn3-203ENSMUST00000093490 EsrrgP62509 458 aa16.89■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Llgl2Q3TJ91 1027 aa16.89■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Atg9aQ68FE2 551 aa16.89■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Cmtm5Q9D6G9 156 aa16.89■□□□□ 0.3
Clcn3-203ENSMUST00000093490 Kbtbd4Q8R179 534 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Bzw1Q9CQC6 419 aaKnown RBP16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 KynuQ9CXF0 464 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Ddx25Q9QY15 484 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Rbp3P49194 1234 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Psmc5P62196 406 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Pcdhb14Q6PB90 796 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 AdalQ80SY6 360 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Slc38a7Q8BWH0 463 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Gm21962L7N280 338 aa16.89■□□□□ 0.29
Clcn3-203ENSMUST00000093490 Ap3m2Q8R2R9 418 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms