RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Lrrc24Q8BHA1 521 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Nsmce3Q9CPR8 279 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Thap11Q9JJD0 305 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Hic2Q9JLZ6 619 aaKnown RBP17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Lipo1J3QME6 396 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Calb1P12658 261 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Lmnb1P14733 588 aaKnown RBP17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Casp1P29452 402 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Pdha2P35487 391 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Slc7a1Q09143 622 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Prpf18Q8BM39 342 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Cdk9Q99J95 372 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Dctn2Q99KJ8 402 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Cmtm5Q9D6G9 156 aa17.54■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Ms4a2P20490 235 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Dynlt1P51807 113 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Madcam1Q61826 405 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Rad17Q6NXW6 688 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Ube3bQ9ES34 1070 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Mapk13Q9Z1B7 366 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Usp42B2RQC2 1324 aaKnown RBP17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Znf521Q6KAS7 1311 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 DohhA0A1Y7VJ29 135 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Pole2O54956 527 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Serpina1aP07758 413 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Ccdc90bQ8C3X2 256 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Hacd3Q8K2C9 362 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Pomgnt1Q91X88 660 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Tfap4Q9JIZ5 338 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Cdh15P33146 784 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Syce2Q505B8 171 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Vav2Q60992 868 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Ccdc85bQ6PDY0 202 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Pglyrp2Q8VCS0 530 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Net1Q9Z206 595 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Rps6ka3P18654 740 aaKnown RBP17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Ubn1Q4G0F8 1135 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Itih1Q61702 907 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Otud6aQ6IE21 290 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Tmem63cQ8CBX0 802 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Ercc4Q9QZD4 917 aa17.53■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Arl4cP61208 192 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Fam160a1Q505K2 1081 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Iars2Q8BIJ6 1012 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Lzts2Q91YU6 671 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Nip7Q9CXK8 180 aaKnown RBP17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Snf8Q9CZ28 258 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 CinpQ9D0V8 212 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Iqcf1Q9D9K8 182 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 MybP06876 636 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 SftpbP50405 377 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Ankrd27Q3UMR0 1048 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Kctd21Q3URF8 260 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 GmipQ6PGG2 971 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Gm5622Q810Q0 167 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Oxr1Q4KMM3 866 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 BcrQ6PAJ1 1270 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Jmjd4Q8BFT6 427 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Adprhl2Q8CG72 370 aa17.52■□□□□ 0.4
Col17a1-202ENSMUST00000086923 Adcy9P51830 1353 aa17.52■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Med23Q80YQ2 1367 aa17.52■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Eme2Q56A04 373 aa17.52■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Trim47Q8C0E3 641 aa17.52■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Mzt2Q9CQ25 159 aa17.52■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Ttc33Q9D6K7 262 aa17.52■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Apobec2Q9WV35 224 aa17.52■□□□□ 0.39
Col17a1-202ENSMUST00000086923 YwhahP68510 246 aaKnown RBP17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Zscan2Q07230 614 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Xlr3aQ60595 226 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Mtmr6Q8VE11 617 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Rbm43Q99J64 343 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Hmx1O70218 332 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Rag1P15919 1040 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 RargP18911 458 aaKnown RBP17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 StrbpQ91WM1 672 aaKnown RBP17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Neo1P97798 1493 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Gm38392E9Q2A2 434 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Psmb9P28076 219 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Jdp2P97875 163 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Ddr1Q03146 911 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Ino80dQ66JY2 873 aaKnown RBP17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Rmdn2Q8BSE0 410 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Tigd4Q8BUZ3 513 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Ascc2Q91WR3 749 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Tnpo2Q99LG2 887 aaKnown RBP17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 TriqkB2B9E1 86 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 C1qbpO35658 278 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Hps5P59438 1126 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Trim43bP86448 445 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 MlxipQ2VPU4 917 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Snx30Q8CE50 437 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Irs4Q9Z0Y7 1216 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Kiaa1107Q80TK0 1369 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Gm10639E9Q6L7 222 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Gm4758L7N258 96 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Gsta2P10648 222 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Ceacam5Q3UKK2 947 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Cep95Q8BVV7 827 aa17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Vwa5aQ99KC8 793 aaKnown RBP17.51■□□□□ 0.39
Col17a1-202ENSMUST00000086923 Nr1i3O35627 358 aa17.5■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms