RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Obsl1D3YYU8 1804 aaKnown RBP20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Cd70O55237 195 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Cbfa2t2O70374 594 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Hoxc8P09025 242 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Aldh1a1P24549 501 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ppm1aP49443 382 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 DmpkP54265 631 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 NcanP55066 1268 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Csf2raQ00941 388 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Sun3Q5SS91 320 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ppp1r13bQ62415 1087 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Hook1Q8BIL5 728 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Slc9a7Q8BLV3 726 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ccdc122Q8BVN0 290 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Zmynd15Q8C0R7 736 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 NcaphQ8C156 731 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Dmtf1Q8CE22 761 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Olfr397Q8VEZ6 315 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Prmt7Q922X9 692 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Atp6ap2Q9CYN9 350 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Trpm5Q9JJH7 1158 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Sh3bgrQ9WUZ7 214 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Mx2Q9WVP9 655 aa20.54■□□□□ 0.88
Vti1b-201ENSMUST00000055262 MtrA6H5Y3 1253 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Apol7aB2RT54 418 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 DgkkE9Q7N4 1118 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Gm4788E9Q8B5 879 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Gm3383J3QQ59 259 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Clk2O35491 499 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Apba3O88888 571 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Rrp12Q6P5B0 1295 aaKnown RBP20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 C6.1alQ7M757 291 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Cyp4f39Q8BGU0 532 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Btnl9Q8BJE2 536 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 VcpkmtQ8C436 228 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Washc1Q8VDD8 475 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Brms1Q99N20 246 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Pkd2l2Q9JLG4 621 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 PdcQ9QW08 244 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Foxe3Q9QY14 288 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Phtf1Q9QZ09 761 aa20.53■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Tbkbp1A2A9T0 611 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Axin2O88566 840 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Inpp5jP59644 1003 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Znf800Q0VEE6 662 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Mcm7Q61881 719 aaKnown RBP20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Gpbp1l1Q6NZP2 473 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Aggf1Q7TN31 711 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Cep128Q8BI22 1102 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ccdc15Q8C9M2 810 aa20.52■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Herc3A6H6S0 1050 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Trappc11B2RXC1 1133 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Rsph10bE9PYQ0 876 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Rrp1P56183 494 aaKnown RBP20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Lman2lP59481 347 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Tarbp2P97473 365 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Kmt5aQ2YDW7 349 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Scarf1Q5ND28 820 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Atp6v0d2Q80SY3 350 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Stoml1Q8CI66 399 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 OtoaQ8K561 1137 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Etv3Q8R4Z4 513 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Wnt8bQ9WUD6 350 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Tmem131O70472 1877 aa20.51■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Kansl3A2RSY1 903 aaKnown RBP20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Gm12800B1AUV4 484 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Gm12794L7MTS5 483 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Slc16a2O70324 545 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Idh1O88844 414 aaKnown RBP20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Pcmtd1P59913 357 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Casp7P97864 303 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Col9a2Q07643 688 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Entpd7Q3TCT4 606 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Exoc3Q6KAR6 755 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Gemin4Q6P6L6 1058 aaKnown RBP20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Trim9Q8C7M3 817 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Adamts9E9PUN6 1931 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 DcxO88809 366 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Adam15O88839 864 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 IqceQ6PCQ0 778 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Fam49aQ8BHZ0 323 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Pde5aQ8CG03 865 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Tspan8Q8R3G9 235 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 TnmdQ9EP64 317 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Atp1a4Q9WV27 1032 aa20.5■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Ttll6A4Q9E8 822 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Ephb4P54761 987 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Etv6P97360 485 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Nsun7Q14AW5 724 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 E2f8Q58FA4 860 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Pi4kbQ8BKC8 816 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Tbc1d13Q8R3D1 400 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Pcdhb15Q91Y04 786 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Ddah1Q9CWS0 285 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Dusp10Q9ESS0 483 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 DgkeQ9R1C6 564 aa20.49■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Pcdh11xF6ZNL5 1338 aa20.48■□□□□ 0.87
Vti1b-201ENSMUST00000055262 CluhQ5SW19 1315 aa20.48■□□□□ 0.87
Vti1b-201ENSMUST00000055262 BC025446A0A087WQT1 134 aa20.48■□□□□ 0.87
Vti1b-201ENSMUST00000055262 Atp2b1G5E829 1220 aa20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms