RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Frmd8Q3UFK8 466 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Kctd1Q5M956 257 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Specc1Q5SXY1 1067 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 HnrnpdQ60668 355 aaKnown RBP17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Gja3Q64448 417 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Tbc1d10cQ8C9V1 444 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Fam228aQ8CDW1 299 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Lsm14bQ8CGC4 385 aaKnown RBP17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Kiaa1024Q8K3V7 917 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Klhl36Q8R124 613 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Bhmt2Q91WS4 363 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Slc5a5Q99PN0 618 aa17.54■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Zfp984A2A7A2 547 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Dnaaf5B9EJR8 853 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ccdc78D3Z5T1 437 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Gm6588E9Q3K0 461 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ccdc84Q4VA36 332 aaKnown RBP17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Klra5Q60652 266 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Rps6ka6Q7TPS0 764 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 R3hdm2Q80TM6 1044 aaKnown RBP17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Q8BGC1 442 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ppp1r11Q8K1L5 131 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Lztr1Q9CQ33 837 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Josd2Q9CR30 188 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Grtp1Q9D3N8 359 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Gtf2iQ9ESZ8 998 aaKnown RBP17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Slc5a4aQ9ET37 656 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Pex11aQ9Z211 246 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Eif2ak1Q9Z2R9 619 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 SynrgQ5SV85 1306 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Col11a2Q64739 1736 aa17.53■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 PtenO08586 403 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Barx2O08686 283 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Mucl2P02815 138 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Tal1P22091 329 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ctnna1P26231 906 aaKnown RBP17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Polr2fP61219 127 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Irx1P81068 480 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Cyfip2Q5SQX6 1253 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Akap4Q60662 849 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 EsrrbQ61539 433 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ppp2r2aQ6P1F6 447 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Fgd5Q80UZ0 1219 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Depdc1aQ8CIG0 804 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Lgi2Q8K4Z0 550 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Gps2Q921N8 327 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 ArpinQ9D0A3 226 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Stx17Q9D0I4 301 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Fthl17aQ9DAX0 182 aa17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Drg2Q9QXB9 364 aaKnown RBP17.52■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ttc13A0A1L1SSC7 844 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Hsf3D0VYS2 492 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ap1m1P35585 423 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ccdc33Q3ULW6 985 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tspyl3Q3UYP3 334 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Fbxw10Q5SUS0 1030 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Kif5bQ61768 963 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Lilrb4Q64281 335 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Adgrg6Q6F3F9 1165 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Trim37Q6PCX9 961 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Slc17a8Q8BFU8 601 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Myl7Q9QVP4 175 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Plxnb2B2RXS4 1842 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gm4907B1AXB9 411 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Wdr72D3YYM4 1114 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Usp17lbE9Q9U0 468 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Xirp1O70373 1129 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Serpina1aP07758 413 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Serpina1cQ00896 412 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Serpina1dQ00897 413 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Islr2Q5RKR3 745 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Arhgap44Q5SSM3 814 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Krt15Q61414 452 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tmc4Q7TQ65 694 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Lrit1Q8K099 624 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Dr1Q91WV0 176 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Golph3Q9CRA5 298 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Psma8Q9CWH6 250 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ears2Q9CXJ1 523 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Zcrb1Q9CZ96 217 aaKnown RBP17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Fam173bQ9D1Z3 247 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Slc34a2Q9DBP0 697 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gdf11Q9Z1W4 405 aa17.51■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gm10110D3Z5M2 615 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Mroh9G5E8L9 891 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Zfp408H7BX78 710 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Rad51bO35719 350 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Mybl2P48972 704 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Atp2b4Q6Q477 1205 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Sgsm1Q8BPQ7 1093 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Scfd1Q8BRF7 639 aaKnown RBP17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Scyl2Q8CFE4 930 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Fam193aQ8CGI1 1231 aaKnown RBP17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gmcl1Q920G9 524 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Pstpip2Q99M15 334 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Edf1Q9JMG1 148 aaKnown RBP17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tlr2Q9QUN7 784 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Phf2Q9WTU0 1096 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gm28036V9GXJ1 658 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Adamtsl1Q8BLI0 1745 aa17.5■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms