RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Gpsm2Q8VDU0 679 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ciapin1Q8WTY4 309 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ddah1Q9CWS0 285 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Akt1s1Q9D1F4 257 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Gm9774A0A0A6YVU8 407 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 EsrraO08580 422 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 IkbkgO88522 412 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Alox15P39654 663 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Zbtb39Q6PDK0 712 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Zfp449Q8CB76 518 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Yipf1Q91VU1 306 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Wbp11Q923D5 641 aaKnown RBP17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Tlr3Q99MB1 905 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 4933428M09RikQ9D3X3 192 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Atp10bB1AWN4 1474 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Cul4bA2A432 970 aaKnown RBP17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Il2P04351 169 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Krt26Q3TRJ4 462 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Zc3h6Q8BYK8 1177 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Myo1hQ9D6A1 958 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Mcf2A2AEU1 1111 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Arhgap42B2RQE8 841 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Hoxc10P31257 342 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Cyp2e1Q05421 493 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 UrgcpQ5NCI0 926 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Znf12Q7TSI0 686 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Snip1Q8BIZ6 383 aaKnown RBP17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Gprasp2Q8BUY8 826 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Gps1Q99LD4 471 aaKnown RBP17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Bzw1Q9CQC6 419 aaKnown RBP17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Klc4Q9DBS5 619 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ccng2O08918 344 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Nr1i3O35627 358 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Znf827Q505G8 1078 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Krt31Q61765 416 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Dppa3Q8QZY3 150 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Drap1Q9D6N5 205 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Cpsf3Q9QXK7 684 aa17.79■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 OatP29758 439 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Tbc1d19Q8VDV7 526 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 TprnA2AI08 749 aaKnown RBP17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 LbrQ3U9G9 626 aaKnown RBP17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Sh3gl1Q62419 368 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Hpcal4Q8BGZ1 191 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ranbp17Q99NF8 1088 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Polr3eQ9CZT4 710 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Zfyve16Q80U44 1528 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 MlxipQ2VPU4 917 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Irak1Q62406 710 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Hdac10Q6P3E7 666 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Fnbp1Q80TY0 616 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Uba6Q8C7R4 1053 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Pls3Q99K51 630 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Pcsk1nQ9QXV0 258 aa17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Trim71Q1PSW8 855 aaKnown RBP17.78■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Wdr19Q3UGF1 1341 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Stat3P42227 770 aaKnown RBP17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Foxn3Q499D0 457 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Olfr832Q7TRG9 312 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Tcp10aQ80W76 438 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Fam49aQ8BHZ0 323 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Lig4Q8BTF7 911 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ophn1Q99J31 802 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ccdc182Q9D9C6 152 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Nedd4P46935 887 aaKnown RBP17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Fam183bQ5NC57 135 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Kbtbd13Q8C828 458 aa17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Taco1Q8K0Z7 294 aaKnown RBP17.77■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Upf3bQ3ULL6 472 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Kcnq3Q8K3F6 873 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 OscarQ8VBT3 265 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 PccaQ91ZA3 724 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Cog1Q9Z160 980 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Nme9A0A1L1SUL6 329 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Myl1P05977 188 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Caprin1Q60865 707 aaKnown RBP17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Atg16l1Q8C0J2 607 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Trim9Q8C7M3 817 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Gimap4Q99JY3 219 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Tktl2Q9D4D4 627 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 1700013H16RikQ9DAC5 291 aa17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Ybx3Q9JKB3 361 aaKnown RBP17.77■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Kif5aP33175 1027 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Arl4cP61208 192 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Znf496Q5SXI5 585 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Mapk4Q6P5G0 583 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Cep95Q8BVV7 827 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Cmtm5Q9D6G9 156 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 MycbpQ9EQS3 103 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 EmsyQ8BMB0 1264 aaKnown RBP17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Mageb16Q9CWV4 363 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Add1Q9QYC0 735 aaKnown RBP17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Ccdc153P0C7Q1 202 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 RaraP11416 462 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Psen2Q61144 448 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Akap7Q7TN79 314 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Fbxo44Q8BK26 255 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Slc7a14Q8BXR1 771 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Rfx6Q8C7R7 927 aa17.76■□□□□ 0.43
Ubfd1-201ENSMUST00000033158 Sgpp1Q9JI99 430 aa17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms