RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Tmem39bQ810L4 492 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Slc4a8Q8JZR6 1089 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Med24Q99K74 987 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Smco2Q9DA21 347 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cse1lQ9ERK4 971 aaKnown RBP13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Lztfl1Q9JHQ5 299 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gm38392E9Q2A2 434 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Phactr1Q2M3X8 580 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tfe3Q64092 572 aaKnown RBP13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Btnl9Q8BJE2 536 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Eps8l2Q99K30 729 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fam111aQ9D2L9 613 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fthl17aQ9DAX0 182 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ly6iQ9WU67 134 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Eddm13E9Q7F5 164 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Sema4dO09126 861 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Idh1O88844 414 aaKnown RBP13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gna15P30678 374 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Rit2P70425 217 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cul4aQ3TCH7 759 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Frmd8Q3UFK8 466 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cacna2d4Q5RJF7 1116 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 FdxrQ61578 494 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Secisbp2lQ6A098 1086 aaKnown RBP13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 SugctQ7TNE1 436 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Psmd5Q8BJY1 504 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gprasp2Q8BUY8 826 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Usp38Q8BW70 1042 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Arfgap2Q99K28 520 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 GrapQ9CX99 217 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gm15448F6PZL4 682 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gm8298J3QPI0 401 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fgfr2P21803 821 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 PltpP55065 493 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Erbb2P70424 1256 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Znf367Q0VDT2 340 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Vwa3aQ3UVV9 1148 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Krt35Q497I4 455 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Asap3Q5U464 904 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Spag7Q7TNE3 227 aaKnown RBP13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Sun2Q8BJS4 731 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Calml4Q91WQ9 153 aa13.87□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Megf6Q80V70 1572 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Dhx15O35286 795 aaKnown RBP13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Il27raO70394 623 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Becn2P0DM65 447 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Hsd17b1P51656 344 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Rapgef1Q3UHC1 1224 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Spats2Q8K1N4 545 aaKnown RBP13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Hdac9Q99N13 588 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Zcchc17Q9ESX4 241 aaKnown RBP13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cabp5Q9JLK3 173 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tjp3Q9QXY1 905 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cntnap5cQ0V8T7 1305 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Odf2A3KGV1 830 aaKnown RBP13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 TyrobpO54885 114 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 MyocO70624 490 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Got1P05201 413 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gja3Q64448 417 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Raver2Q7TPD6 673 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tor1aip2Q8BYU6 502 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Vps52Q8C754 723 aaKnown RBP13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Golph3Q9CRA5 298 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Arl2bpQ9D385 163 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Grtp1Q9D3N8 359 aa13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Nup50Q9JIH2 466 aaKnown RBP13.86□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Akr1b10G5E895 316 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Kiaa1211Q5PR69 1207 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ppp2r5aQ6PD03 486 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 ErfeQ6PGN1 340 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tmem132dQ76HP3 1097 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Snapc2Q91XA5 359 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 LrmdaQ9D9B4 229 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Dnajb6O54946 365 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Xirp1O70373 1129 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Rps6ka1P18653 724 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Acsbg2Q2XU92 667 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fdxacb1Q3UY23 622 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Znf652Q5DU09 608 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ift20Q61025 132 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Stxbp2Q64324 593 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 KaznQ69ZS8 779 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ccdc148Q6P5U8 527 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Lmo3Q8BZL8 145 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Rtp1Q8C8C1 263 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Nup58Q8R332 587 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cd248Q91V98 765 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Slc15a2Q9ES07 729 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gfpt2Q9Z2Z9 682 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Parp2O88554 559 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Lgr6Q3UVD5 967 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 PnocQ64387 187 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Krt74Q6IFZ9 495 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 TbataQ7TSD4 393 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 R3hdm2Q80TM6 1044 aaKnown RBP13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Nipa1Q8BHK1 323 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tut1Q8R3F9 869 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Nr3c2Q8VII8 978 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Atp5c1Q91VR2 298 aaKnown RBP13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gbp7Q91Z40 638 aa13.85□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms