RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Map2k2Q63932 401 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Smarca1Q6PGB8 1046 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kcng4Q80XM3 506 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 VmacQ8BP01 174 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Lmcd1Q8VEE1 365 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Nt5c1bQ91YE9 573 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Rev1Q920Q2 1249 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Nsmce3Q9CPR8 279 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Acot3Q9QYR7 432 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 NbnQ9R207 751 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Plcb1Q9Z1B3 1216 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Fam171a1A2ATK9 892 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Bpifb4A2BGH0 617 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gm6583E9Q8Z1 469 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gm21969J3QJZ1 289 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Chil3O35744 398 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 SsbP32067 415 aaKnown RBP12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gjb4Q02738 266 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Traf3ip1Q149C2 625 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cyp7b1Q60991 507 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ppp1r14bQ62084 147 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 DlatQ8BMF4 642 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 NelfbQ8C4Y3 580 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Lrrc14Q8VC16 493 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Hps4Q99KG7 671 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 ArpinQ9D0A3 226 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Krt27Q9Z320 448 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Btbd35f15A0A087WR44 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f12A0A0A0MQP3 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f9A2BFZ7 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f7A2BHG6 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f19A2CG71 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f10A2CG92 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f3A2CGC2 496 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f13B8JKF6 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f2J3QMS5 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f25J3QMV9 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f6J3QMW9 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f26J3QNK2 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f24J3QNQ5 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f8J3QQ50 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f17L7MU81 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f18L7MU83 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Fam71e2L7N480 754 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ampd3O08739 766 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Akr1b7P21300 316 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Hspa9P38647 679 aaKnown RBP12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Nat3P50296 290 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f14Q1LZI5 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Btbd35f27Q5FWA1 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Hif1aQ61221 836 aaKnown RBP12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 RragbQ6NTA4 374 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Cfap206Q6PE87 622 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tarsl2Q8BLY2 790 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Cpsf7Q8BTV2 471 aaKnown RBP12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Fermt2Q8CIB5 680 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ndufv1Q91YT0 464 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 GMCL1P1Q99N64 498 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Krt23Q99PS0 422 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Capn12Q9ER56 720 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 SmapQ9R0P4 181 aaKnown RBP12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Homer1Q9Z2Y3 366 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Lactbl1S4R213 581 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Myh15E9Q264 1925 aa12.46□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Igsf9bE9PZ19 1328 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gm3893E9Q1I1 302 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gm44G3UW88 330 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Nfil3O08750 462 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Atp9aO70228 1047 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Rag1P15919 1040 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Wnt7aP24383 349 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Hoxa2P31245 372 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ifnar1P33896 590 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Swap70Q6A028 585 aaKnown RBP12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ncapg2Q6DFV1 1138 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Csrnp2Q8BGQ2 534 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Caps2Q8BUG5 550 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Nat14Q8BVG8 206 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Q8CD60 292 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Atp1a1Q8VDN2 1023 aaKnown RBP12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Pcdha12Q91Y18 950 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 St5Q924W7 1134 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Q9DA42 136 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Dclre1aQ9JIC3 1026 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 RpgrQ9R0X5 1001 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ltbp1Q8CG19 1712 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 4932429P05RikA2ADI4 785 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 4930523C07RikE9Q2T4 99 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gucy1b3O54865 620 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Eif6O55135 245 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 AfpP02772 605 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Calb2Q08331 271 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tmcc1Q69ZZ6 649 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ankrd13aQ80UP5 588 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Mfn1Q811U4 741 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 AgpsQ8C0I1 645 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Caskin2Q8VHK1 1201 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Smap1Q91VZ6 440 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tomm20lQ9D4V6 152 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Scgb2b12S4R2L0 112 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms