RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YOR292CQ08743 309 aa-2.34□□□□□ -2.78
snR40snR40 IES3Q12345 250 aa-2.34□□□□□ -2.78
snR40snR40 ORT1Q12375 292 aa-2.34□□□□□ -2.78
snR40snR40 YDL199CQ12407 687 aa-2.34□□□□□ -2.78
snR40snR40 PIS1P06197 220 aaKnown RBP-2.35□□□□□ -2.79
snR40snR40 RPL8AP17076 256 aaKnown RBP-2.35□□□□□ -2.79
snR40snR40 GFD2P25370 566 aaKnown RBP-2.35□□□□□ -2.79
snR40snR40 DOA4P32571 926 aa-2.35□□□□□ -2.79
snR40snR40 GGC1P38988 300 aa-2.35□□□□□ -2.79
snR40snR40 HEM14P40012 539 aa-2.35□□□□□ -2.79
snR40snR40 ALG5P40350 334 aa-2.35□□□□□ -2.79
snR40snR40 UTP25P40498 721 aaKnown RBP-2.35□□□□□ -2.79
snR40snR40 ASN2P49090 572 aaKnown RBP-2.35□□□□□ -2.79
snR40snR40 BET5Q03630 159 aa-2.35□□□□□ -2.79
snR40snR40 TAF7Q05021 590 aa-2.35□□□□□ -2.79
snR40snR40 ECM19Q06011 112 aa-2.35□□□□□ -2.79
snR40snR40 PSK2Q08217 1101 aa-2.35□□□□□ -2.79
snR40snR40 PRM3Q08931 133 aa-2.35□□□□□ -2.79
snR40snR40 FCY22Q12119 530 aa-2.35□□□□□ -2.79
snR40snR40 SFM1Q12314 213 aa-2.35□□□□□ -2.79
snR40snR40 ARP7Q12406 477 aa-2.35□□□□□ -2.79
snR40snR40 PCL9Q12477 304 aa-2.35□□□□□ -2.79
snR40snR40 SEC39Q12745 709 aa-2.35□□□□□ -2.79
snR40snR40 YLR302CO13544 120 aa-2.36□□□□□ -2.79
snR40snR40 HSC82P15108 705 aaKnown RBP-2.36□□□□□ -2.79
snR40snR40 BGL2P15703 313 aaKnown RBP-2.36□□□□□ -2.79
snR40snR40 VMA16P23968 213 aa-2.36□□□□□ -2.79
snR40snR40 UGX2P32772 223 aa-2.36□□□□□ -2.79
snR40snR40 GPG1P53130 126 aa-2.36□□□□□ -2.79
snR40snR40 YGR015CP53208 328 aa-2.36□□□□□ -2.79
snR40snR40 TIM21P53220 239 aa-2.36□□□□□ -2.79
snR40snR40 PRM6Q04705 352 aa-2.36□□□□□ -2.79
snR40snR40 MEU1Q07938 337 aaKnown RBP RIP-Chip data-2.36□□□□□ -2.79not detected
snR40snR40 TIM22Q12328 207 aa-2.36□□□□□ -2.79
snR40snR40 SEC53P07283 254 aaKnown RBP-2.37□□□□□ -2.79
snR40snR40 MDH1P17505 334 aaKnown RBP RIP-Chip data-2.37□□□□□ -2.79not detected
snR40snR40 PRP2P20095 876 aaPredicted RBP-2.37□□□□□ -2.79
snR40snR40 RRT12P25381 491 aa-2.37□□□□□ -2.79
snR40snR40 YCL068CP25593 260 aa-2.37□□□□□ -2.79
snR40snR40 YMR147WP40218 223 aaKnown RBP-2.37□□□□□ -2.79
snR40snR40 YJR141WP47172 347 aaPredicted RBP-2.37□□□□□ -2.79
snR40snR40 PMT5P52867 743 aa-2.37□□□□□ -2.79
snR40snR40 COG1P53079 417 aa-2.37□□□□□ -2.79
snR40snR40 UBC7Q02159 165 aa-2.37□□□□□ -2.79
snR40snR40 VID22Q05934 901 aa-2.37□□□□□ -2.79
snR40snR40 BLM10P43583 2143 aa-2.38□□□□□ -2.79
snR40snR40 FOB1O13329 566 aa-2.38□□□□□ -2.79
snR40snR40 COR1P07256 457 aa-2.38□□□□□ -2.79
snR40snR40 YBR144CP34215 104 aa-2.38□□□□□ -2.79
snR40snR40 YBR138CP38277 524 aa-2.38□□□□□ -2.79
snR40snR40 MBB1P39534 108 aa-2.38□□□□□ -2.79
snR40snR40 MRPL49P40858 161 aaPredicted RBP-2.38□□□□□ -2.79
snR40snR40 MND1P53102 219 aa-2.38□□□□□ -2.79
snR40snR40 UME1Q03010 460 aa-2.38□□□□□ -2.79
snR40snR40 CCE1Q03702 353 aa-2.38□□□□□ -2.79
snR40snR40 UTP15Q04305 513 aaKnown RBP-2.38□□□□□ -2.79
snR40snR40 HIS4P00815 799 aaKnown RBP-2.39□□□□□ -2.79
snR40snR40 DPM1P14020 267 aaKnown RBP-2.39□□□□□ -2.79
snR40snR40 PEP3P27801 918 aa-2.39□□□□□ -2.79
snR40snR40 KRE6P32486 720 aa-2.39□□□□□ -2.79
snR40snR40 SFC1P33303 322 aa-2.39□□□□□ -2.79
snR40snR40 MAL33P38157 468 aa-2.39□□□□□ -2.79
snR40snR40 NCS2P53923 493 aaPredicted RBP-2.39□□□□□ -2.79
snR40snR40 GRH1Q04410 372 aaKnown RBP-2.39□□□□□ -2.79
snR40snR40 RAV1P47104 1357 aa-2.39□□□□□ -2.79
snR40snR40 FMP49A0A023PZB3 126 aa-2.4□□□□□ -2.79
snR40snR40 UNG1P12887 359 aa-2.4□□□□□ -2.79
snR40snR40 SPO12P17123 173 aa-2.4□□□□□ -2.79
snR40snR40 PAP1P29468 568 aaKnown RBP-2.4□□□□□ -2.79
snR40snR40 IMP2'P32351 346 aa-2.4□□□□□ -2.79
snR40snR40 ANP1P32629 500 aa-2.4□□□□□ -2.79
snR40snR40 YGL114WP53134 725 aa-2.4□□□□□ -2.79
snR40snR40 CPR6P53691 371 aaKnown RBP-2.4□□□□□ -2.79
snR40snR40 COS1P53822 381 aa-2.4□□□□□ -2.79
snR40snR40 CNM67P53865 581 aaKnown RBP-2.4□□□□□ -2.79
snR40snR40 RCN2Q12044 265 aa-2.4□□□□□ -2.79
snR40snR40 TPT1Q12272 230 aaKnown RBP-2.4□□□□□ -2.79
snR40snR40 HTZ1Q12692 134 aaKnown RBP-2.4□□□□□ -2.79
snR40snR40 SSE2P32590 693 aaKnown RBP-2.41□□□□□ -2.8
snR40snR40 PAC11P40960 533 aa-2.41□□□□□ -2.8
snR40snR40 YJR054WP47114 497 aa-2.41□□□□□ -2.8
snR40snR40 CAX4P53223 239 aa-2.41□□□□□ -2.8
snR40snR40 PIL1P53252 339 aaKnown RBP-2.41□□□□□ -2.8
snR40snR40 DSL1P53847 754 aa-2.41□□□□□ -2.8
snR40snR40 SPR6Q01684 191 aa-2.41□□□□□ -2.8
snR40snR40 SKO1Q02100 647 aa-2.41□□□□□ -2.8
snR40snR40 CAB5Q03941 241 aa-2.41□□□□□ -2.8
snR40snR40 COX17Q12287 69 aa-2.41□□□□□ -2.8
snR40snR40 RAS2P01120 322 aaKnown RBP-2.42□□□□□ -2.8
snR40snR40 SOR1P35497 357 aaKnown RBP-2.42□□□□□ -2.8
snR40snR40 DOT5P40553 215 aa-2.42□□□□□ -2.8
snR40snR40 HMS2P47175 358 aa-2.42□□□□□ -2.8
snR40snR40 OAZ1Q02803 292 aa-2.42□□□□□ -2.8
snR40snR40 SOR2Q07786 357 aa-2.42□□□□□ -2.8
snR40snR40 YDR018CQ12185 396 aa-2.42□□□□□ -2.8
snR40snR40 NCA2Q12374 616 aa-2.42□□□□□ -2.8
snR40snR40 PCD1Q12524 340 aa-2.42□□□□□ -2.8
snR40snR40 YCR024C-BQ3E7Z8 88 aa-2.42□□□□□ -2.8
snR40snR40 MF(ALPHA)1P01149 165 aa-2.43□□□□□ -2.8
snR40snR40 HIS3P06633 220 aa-2.43□□□□□ -2.8
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms