RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 SGA1P08019 549 aa-0.91□□□□□ -2.56
snR38snR38 INO2P26798 304 aa-0.91□□□□□ -2.56
snR38snR38 MRP20P32387 263 aa-0.91□□□□□ -2.56
snR38snR38 COS9P36034 407 aa-0.91□□□□□ -2.56
snR38snR38 AUR1P36107 401 aaPredicted RBP-0.91□□□□□ -2.56
snR38snR38 TRM7P38238 310 aaKnown RBP-0.91□□□□□ -2.56
snR38snR38 RCK1P38622 512 aa-0.91□□□□□ -2.56
snR38snR38 CTM1P38818 585 aa-0.91□□□□□ -2.56
snR38snR38 ROG1P53118 685 aa-0.91□□□□□ -2.56
snR38snR38 CDH1P53197 566 aa-0.91□□□□□ -2.56
snR38snR38 MRPL13Q02204 264 aa-0.91□□□□□ -2.56
snR38snR38 YMR007WQ03675 126 aa-0.91□□□□□ -2.56
snR38snR38 YMR010WQ03687 405 aa-0.91□□□□□ -2.56
snR38snR38 API2Q04413 109 aa-0.91□□□□□ -2.56
snR38snR38 SFM1Q12314 213 aa-0.91□□□□□ -2.56
snR38snR38 SSM4P40318 1319 aa-0.91□□□□□ -2.56
snR38snR38 VAR1P02381 398 aa-0.92□□□□□ -2.56
snR38snR38 ATP10P18496 279 aa-0.92□□□□□ -2.56
snR38snR38 YKL133CP36066 463 aa-0.92□□□□□ -2.56
snR38snR38 CAB3P36076 571 aa-0.92□□□□□ -2.56
snR38snR38 GRE3P38715 327 aaKnown RBP RIP-Chip data-0.92□□□□□ -2.56not detected
snR38snR38 OCA5P38738 679 aa-0.92□□□□□ -2.56
snR38snR38 GGC1P38988 300 aa-0.92□□□□□ -2.56
snR38snR38 ESL1P40456 1118 aa-0.92□□□□□ -2.56
snR38snR38 YJR142WP47173 342 aa-0.92□□□□□ -2.56
snR38snR38 LYS4P49367 693 aaPredicted RBP-0.92□□□□□ -2.56
snR38snR38 BNI5P53890 448 aaKnown RBP-0.92□□□□□ -2.56
snR38snR38 GIP3Q03016 1276 aa-0.92□□□□□ -2.56
snR38snR38 UTP15Q04305 513 aaKnown RBP-0.92□□□□□ -2.56
snR38snR38 FPR1P20081 114 aaKnown RBP-0.93□□□□□ -2.56
snR38snR38 UBC1P21734 215 aaKnown RBP-0.93□□□□□ -2.56
snR38snR38 CLB1P24868 471 aa-0.93□□□□□ -2.56
snR38snR38 RRT12P25381 491 aa-0.93□□□□□ -2.56
snR38snR38 SPB1P25582 841 aaPredicted RBP-0.93□□□□□ -2.56
snR38snR38 ECM8P38246 354 aa-0.93□□□□□ -2.56
snR38snR38 EPL1P43572 832 aa-0.93□□□□□ -2.56
snR38snR38 YFR045WP43617 309 aa-0.93□□□□□ -2.56
snR38snR38 TPN1P53099 579 aa-0.93□□□□□ -2.56
snR38snR38 FIN1Q03898 291 aa-0.93□□□□□ -2.56
snR38snR38 BUR2Q05949 395 aa-0.93□□□□□ -2.56
snR38snR38 RDS3Q06835 107 aaPredicted RBP-0.93□□□□□ -2.56
snR38snR38 YPL272CQ08984 517 aa-0.93□□□□□ -2.56
snR38snR38 SRL2Q12020 392 aa-0.93□□□□□ -2.56
snR38snR38 YLR278CQ05854 1341 aa-0.93□□□□□ -2.56
snR38snR38 TDH1P00360 332 aaKnown RBP-0.94□□□□□ -2.56
snR38snR38 MTF2P10849 440 aa-0.94□□□□□ -2.56
snR38snR38 ITR2P30606 609 aa-0.94□□□□□ -2.56
snR38snR38 PRP21P32524 280 aaPredicted RBP-0.94□□□□□ -2.56
snR38snR38 ATP3P38077 311 aaKnown RBP-0.94□□□□□ -2.56
snR38snR38 YBR056WP38081 501 aa-0.94□□□□□ -2.56
snR38snR38 THI2P38141 450 aa-0.94□□□□□ -2.56
snR38snR38 ENP1P38333 483 aaKnown RBP-0.94□□□□□ -2.56
snR38snR38 CCT2P39076 527 aaKnown RBP-0.94□□□□□ -2.56
snR38snR38 YMR147WP40218 223 aaKnown RBP-0.94□□□□□ -2.56
snR38snR38 YIL054WP40524 105 aa-0.94□□□□□ -2.56
snR38snR38 TFG2P41896 400 aaPredicted RBP-0.94□□□□□ -2.56
snR38snR38 ASN2P49090 572 aaKnown RBP-0.94□□□□□ -2.56
snR38snR38 YGL108CP53139 140 aa-0.94□□□□□ -2.56
snR38snR38 RRP46P53256 223 aaPredicted RBP-0.94□□□□□ -2.56
snR38snR38 REX2P54964 269 aaKnown RBP-0.94□□□□□ -2.56
snR38snR38 YML037CQ03703 340 aa-0.94□□□□□ -2.56
snR38snR38 YPL264CQ08980 353 aa-0.94□□□□□ -2.56
snR38snR38 IES3Q12345 250 aa-0.94□□□□□ -2.56
snR38snR38 EMC6Q12431 108 aa-0.94□□□□□ -2.56
snR38snR38 PCL9Q12477 304 aa-0.94□□□□□ -2.56
snR38snR38 TMA17Q12513 150 aa-0.94□□□□□ -2.56
snR38snR38 YCR024C-BQ3E7Z8 88 aa-0.94□□□□□ -2.56
snR38snR38 RPL26AP05743 127 aaKnown RBP-0.95□□□□□ -2.56
snR38snR38 RPL31BP0C2H9 113 aaKnown RBP-0.95□□□□□ -2.56
snR38snR38 CTR86P25355 563 aa-0.95□□□□□ -2.56
snR38snR38 ERG3P32353 365 aa-0.95□□□□□ -2.56
snR38snR38 MMS4P38257 691 aa-0.95□□□□□ -2.56
snR38snR38 PEP8P40335 379 aa-0.95□□□□□ -2.56
snR38snR38 RPL10P41805 221 aaKnown RBP-0.95□□□□□ -2.56
snR38snR38 PHB2P50085 310 aa-0.95□□□□□ -2.56
snR38snR38 YGR015CP53208 328 aa-0.95□□□□□ -2.56
snR38snR38 RPL26BP53221 127 aaKnown RBP-0.95□□□□□ -2.56
snR38snR38 CWC22P53333 577 aaKnown RBP-0.95□□□□□ -2.56
snR38snR38 FSH2Q05015 223 aa-0.95□□□□□ -2.56
snR38snR38 YHC1Q05900 231 aaKnown RBP-0.95□□□□□ -2.56
snR38snR38 SPO77Q06134 477 aa-0.95□□□□□ -2.56
snR38snR38 YOL019WQ08157 551 aa-0.95□□□□□ -2.56
snR38snR38 YOR376WQ08900 122 aa-0.95□□□□□ -2.56
snR38snR38 YPL150WQ12152 901 aa-0.95□□□□□ -2.56
snR38snR38 MCT1Q12283 360 aa-0.95□□□□□ -2.56
snR38snR38 SLH1P53327 1967 aaKnown RBP-0.96□□□□□ -2.56
snR38snR38 CYR1P08678 2026 aaKnown RBP-0.96□□□□□ -2.56
snR38snR38 UNG1P12887 359 aa-0.96□□□□□ -2.56
snR38snR38 CAP2P13517 287 aa-0.96□□□□□ -2.56
snR38snR38 EXG1P23776 448 aaKnown RBP-0.96□□□□□ -2.56
snR38snR38 YGL010WP25338 174 aa-0.96□□□□□ -2.56
snR38snR38 BRF1P29056 596 aa-0.96□□□□□ -2.56
snR38snR38 AFG1P32317 509 aa-0.96□□□□□ -2.56
snR38snR38 ARO4P32449 370 aaKnown RBP-0.96□□□□□ -2.56
snR38snR38 NIP100P33420 868 aa-0.96□□□□□ -2.56
snR38snR38 TIP20P33891 701 aa-0.96□□□□□ -2.56
snR38snR38 SHE1P38200 338 aa-0.96□□□□□ -2.56
snR38snR38 SSU72P53538 206 aaPredicted RBP-0.96□□□□□ -2.56
snR38snR38 GPI15P53961 229 aa-0.96□□□□□ -2.56
snR38snR38 YPL247CQ12523 523 aa-0.96□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 167.4 ms