RNA–Protein interactions for RNA: YPR036W

VMA13, Transcript of Subunit H of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA13, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA13	YPR036W	INN1	P53901	409 aa		5.2	□□□□□ -1.58
VMA13	YPR036W	ARP4	P80428	489 aa		5.2	□□□□□ -1.58
VMA13	YPR036W	VAM6	Q07468	1049 aa		5.2	□□□□□ -1.58
VMA13	YPR036W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
VMA13	YPR036W	BUD7	Q08754	746 aa		5.2	□□□□□ -1.58
VMA13	YPR036W	NDJ1	Q12366	352 aa		5.2	□□□□□ -1.58
VMA13	YPR036W	PRC1	P00729	532 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	ATP2	P00830	511 aa	Known RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	URA3	P03962	267 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	MAS1	P10507	462 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	ART10	P18634	518 aa	Known RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	AAT2	P23542	418 aa	Known RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	HCS1	P34243	683 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	PTC1	P35182	281 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	AST1	P35183	429 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	RCY1	P39531	840 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	PCL6	P40038	420 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	RIO2	P40160	425 aa	Known RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	HPM1	P40481	377 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	AGE2	P40529	298 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
VMA13	YPR036W	YHC3	P47040	408 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	BIO3	P50277	480 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	YGL114W	P53134	725 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	BIO5	P53744	561 aa	Known RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	CUS2	P53830	285 aa	Predicted RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	YNL181W	P53878	407 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	HPT1	Q04178	221 aa	Known RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	ARP10	Q04549	284 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	ASA1	Q06822	443 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	YEH2	Q07950	538 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	SOG2	Q08817	791 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	MRH1	Q12117	320 aa	Predicted RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	ERG27	Q12452	347 aa	Known RBP	5.19	□□□□□ -1.58
VMA13	YPR036W	YLR422W	Q06409	1932 aa		5.19	□□□□□ -1.58
VMA13	YPR036W	RAD7	P06779	565 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	SPE1	P08432	466 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	RPL3	P14126	387 aa	Known RBP	5.18	□□□□□ -1.58
VMA13	YPR036W	SEC62	P21825	274 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	RFA1	P22336	621 aa	Known RBP	5.18	□□□□□ -1.58
VMA13	YPR036W	CMK2	P22517	447 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	MEK1	P24719	497 aa	Predicted RBP	5.18	□□□□□ -1.58
VMA13	YPR036W	YCR099C	P25657	155 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	SIP1	P32578	815 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	PTM1	P32857	523 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	TIF3	P34167	436 aa	Known RBP	5.18	□□□□□ -1.58
VMA13	YPR036W	YKL071W	P36086	256 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	PDX3	P38075	228 aa	Known RBP	5.18	□□□□□ -1.58
VMA13	YPR036W	YBR139W	P38109	508 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	YAR028W	P39548	234 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	PZF1	P39933	429 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	SER3	P40054	469 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	COA1	P40452	197 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	YIR016W	P40572	265 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	HXT14	P42833	540 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	PRP24	P49960	444 aa	Known RBP	5.18	□□□□□ -1.58
VMA13	YPR036W	AMA1	P50082	593 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	NMA2	P53204	395 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	PEF1	P53238	335 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	SSU72	P53538	206 aa	Predicted RBP	5.18	□□□□□ -1.58
VMA13	YPR036W	RMI1	Q02685	241 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	GAS3	Q03655	524 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	SMA2	Q04658	369 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	SNA4	Q07549	140 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	LDB18	Q07887	179 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	ESA1	Q08649	445 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	YDL109C	Q12103	647 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	SUL2	Q12325	893 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	MTR10	Q99189	972 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	VCX1	Q99385	411 aa		5.18	□□□□□ -1.58
VMA13	YPR036W	TRP3	P00937	484 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	KIN2	P13186	1147 aa	Known RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	YSP3	P25036	478 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	YCR090C	P25654	182 aa	Known RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	ATP7	P30902	174 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	AEP1	P32493	518 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	RML2	P32611	393 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	SEC66	P33754	206 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	YMR262W	P38430	313 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	ARN1	P38731	627 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	CCT6	P39079	546 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	NUP60	P39705	539 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	HAT2	P39984	401 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	DIM1	P41819	318 aa	Known RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	UFE1	P41834	346 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	TES1	P41903	349 aa	Known RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	BUD13	P46947	266 aa	Predicted RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	FMP33	P46998	180 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	PET130	P47065	347 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	YJR154W	P47181	346 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	GCV1	P48015	400 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	EXG2	P52911	562 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	BOL2	P53082	120 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	SLX9	P53251	210 aa	Predicted RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	YTP1	P53584	459 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	YNR065C	P53751	1116 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	SLM2	P53955	656 aa		5.17	□□□□□ -1.58
VMA13	YPR036W	YNL010W	P53981	241 aa	Known RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	LSM3	P57743	89 aa	Known RBP	5.17	□□□□□ -1.58
VMA13	YPR036W	TAF12	Q03761	539 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms