RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W MTR3P48240 250 aaPredicted RBP3.81□□□□□ -1.8
SRO7YPR032W YGR053CP53234 283 aa3.81□□□□□ -1.8
SRO7YPR032W YNR065CP53751 1116 aa3.81□□□□□ -1.8
SRO7YPR032W MRPS17Q03246 237 aaPredicted RBP3.81□□□□□ -1.8
SRO7YPR032W UAF30Q08747 228 aa3.81□□□□□ -1.8
SRO7YPR032W RPN5Q12250 445 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W HSP26P15992 214 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8 RIP-Chip
SRO7YPR032W SIR1P21691 654 aa3.81□□□□□ -1.8
SRO7YPR032W RSC6P25632 483 aa3.81□□□□□ -1.8
SRO7YPR032W SYN8P31377 255 aa3.81□□□□□ -1.8
SRO7YPR032W CAT2P32796 670 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W MRPL15P36523 253 aa3.81□□□□□ -1.8
SRO7YPR032W UBX7P38349 436 aa3.81□□□□□ -1.8
SRO7YPR032W NSE4P43124 402 aa3.81□□□□□ -1.8
SRO7YPR032W KXD1P53158 218 aa3.81□□□□□ -1.8
SRO7YPR032W PRM8P53174 237 aa3.81□□□□□ -1.8
SRO7YPR032W MTL1P53214 551 aa3.81□□□□□ -1.8
SRO7YPR032W BRE5P53741 515 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W GIM3P53900 129 aa3.81□□□□□ -1.8
SRO7YPR032W RRN5Q02983 363 aa3.81□□□□□ -1.8
SRO7YPR032W YMD8Q03697 442 aa3.81□□□□□ -1.8
SRO7YPR032W OST6Q03723 332 aa3.81□□□□□ -1.8
SRO7YPR032W OPT2Q06593 877 aa3.81□□□□□ -1.8
SRO7YPR032W HBT1Q07653 1046 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W MFG1Q07684 458 aa3.81□□□□□ -1.8
SRO7YPR032W FMP25Q08023 583 aa3.81□□□□□ -1.8
SRO7YPR032W YOR238WQ08634 303 aa3.81□□□□□ -1.8
SRO7YPR032W SFM1Q12314 213 aa3.81□□□□□ -1.8
SRO7YPR032W PCD1Q12524 340 aa3.81□□□□□ -1.8
SRO7YPR032W YPR145C-AQ2V2P0 78 aa3.81□□□□□ -1.8
SRO7YPR032W FRT1Q99332 602 aa3.81□□□□□ -1.8
SRO7YPR032W GAL80P04387 435 aa3.81□□□□□ -1.8
SRO7YPR032W YPK1P12688 680 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W MTF1P14908 341 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W SRM1P21827 482 aa3.81□□□□□ -1.8
SRO7YPR032W IDP1P21954 428 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W EPT1P22140 391 aa3.81□□□□□ -1.8
SRO7YPR032W MNE1P24720 663 aa3.81□□□□□ -1.8
SRO7YPR032W RSA4P25382 515 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W SNU114P36048 1008 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W DTR1P38125 572 aa3.81□□□□□ -1.8
SRO7YPR032W MAL32P38158 584 aa3.81□□□□□ -1.8
SRO7YPR032W POA1P38218 177 aa3.81□□□□□ -1.8
SRO7YPR032W BUR6P40096 142 aa3.81□□□□□ -1.8
SRO7YPR032W FIS1P40515 155 aa3.81□□□□□ -1.8
SRO7YPR032W UFE1P41834 346 aa3.81□□□□□ -1.8
SRO7YPR032W TOM22P49334 152 aa3.81□□□□□ -1.8
SRO7YPR032W PKP2P53170 491 aa3.81□□□□□ -1.8
SRO7YPR032W MAL12P53341 584 aa3.81□□□□□ -1.8
SRO7YPR032W SDO1Q07953 250 aaKnown RBP3.81□□□□□ -1.8
SRO7YPR032W YOL131WQ08270 108 aa3.81□□□□□ -1.8
SRO7YPR032W LAP2Q10740 671 aa3.81□□□□□ -1.8
SRO7YPR032W REX3Q12090 404 aa3.81□□□□□ -1.8
SRO7YPR032W IZH4Q99393 312 aa3.81□□□□□ -1.8
SRO7YPR032W CDC28P00546 298 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W HTA2P04912 132 aa3.8□□□□□ -1.8
SRO7YPR032W PUT1P09368 476 aa3.8□□□□□ -1.8
SRO7YPR032W MRP1P10662 321 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W YCR061WP25639 631 aa3.8□□□□□ -1.8
SRO7YPR032W FUN26P31381 517 aa3.8□□□□□ -1.8
SRO7YPR032W GSP1P32835 219 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W GSP2P32836 220 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W WBP1P33767 430 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W CBR1P38626 284 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W ALG8P40351 577 aa3.8□□□□□ -1.8
SRO7YPR032W BAP3P41815 604 aa3.8□□□□□ -1.8
SRO7YPR032W IDP2P41939 412 aa3.8□□□□□ -1.8
SRO7YPR032W NET1P47035 1189 aa3.8□□□□□ -1.8
SRO7YPR032W ADO1P47143 340 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W JHD2P47156 728 aaPredicted RBP3.8□□□□□ -1.8
SRO7YPR032W RRT6P53117 311 aaPredicted RBP3.8□□□□□ -1.8
SRO7YPR032W YNL146WP53906 100 aa3.8□□□□□ -1.8
SRO7YPR032W HAS1Q03532 505 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W RKM2Q03942 479 aa3.8□□□□□ -1.8
SRO7YPR032W THP1Q08231 455 aa3.8□□□□□ -1.8
SRO7YPR032W MED7Q08278 222 aa3.8□□□□□ -1.8
SRO7YPR032W DDC1Q08949 612 aa3.8□□□□□ -1.8
SRO7YPR032W GPM2Q12008 311 aa3.8□□□□□ -1.8
SRO7YPR032W SIA1Q12212 622 aa3.8□□□□□ -1.8
SRO7YPR032W MDM12Q92328 271 aa3.8□□□□□ -1.8
SRO7YPR032W FUR4P05316 633 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W CDC4P07834 779 aa3.8□□□□□ -1.8
SRO7YPR032W RPL31AP0C2H8 113 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W RPL31BP0C2H9 113 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W PRE9P23638 258 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W MIR1P23641 311 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W SDH3P33421 198 aa3.8□□□□□ -1.8
SRO7YPR032W SCD5P34758 872 aa3.8□□□□□ -1.8
SRO7YPR032W PCS60P38137 543 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SRO7YPR032W LAS21P40367 830 aa3.8□□□□□ -1.8
SRO7YPR032W FAF1P40546 346 aaPredicted RBP3.8□□□□□ -1.8
SRO7YPR032W YGL159WP53110 370 aa3.8□□□□□ -1.8
SRO7YPR032W YGL039WP53183 348 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W GTR2P53290 341 aa3.8□□□□□ -1.8
SRO7YPR032W MTQ1P53944 314 aa3.8□□□□□ -1.8
SRO7YPR032W MSS11Q03825 758 aa3.8□□□□□ -1.8
SRO7YPR032W BOP2Q06150 570 aa3.8□□□□□ -1.8
SRO7YPR032W SUE1Q06524 206 aa3.8□□□□□ -1.8
SRO7YPR032W SSK1Q07084 712 aa3.8□□□□□ -1.8
SRO7YPR032W CYK3Q07533 885 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms