RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	RSA1	Q08932	381 aa		3.57	□□□□□ -1.84
FDH2	YPL275W	RCN2	Q12044	265 aa		3.57	□□□□□ -1.84
FDH2	YPL275W	VIK1	Q12045	647 aa		3.57	□□□□□ -1.84
FDH2	YPL275W	MED2	Q12124	431 aa		3.57	□□□□□ -1.84
FDH2	YPL275W	IRA2	P19158	3079 aa		3.57	□□□□□ -1.84
FDH2	YPL275W	HIS3	P06633	220 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	RAD52	P06778	471 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	MET8	P15807	274 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	ISY1	P21374	235 aa	Predicted RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	REC107	P21651	314 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	SEC62	P21825	274 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	UBA1	P22515	1024 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	YCR007C	P25354	239 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	YME1	P32795	747 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	SEF1	P34228	1148 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	YKT6	P36015	200 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	DED81	P38707	554 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	SUR2	P38992	349 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	VPS52	P39904	641 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	SSO2	P39926	295 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	SER3	P40054	469 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	JEM1	P40358	645 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	TMA108	P40462	946 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	RSM25	P40496	264 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	UTP25	P40498	721 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	SNL1	P40548	159 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
FDH2	YPL275W	LIA1	P47120	325 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	ABM1	P47146	123 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	YGR067C	P53243	804 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	YGR111W	P53265	400 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	YNL134C	P53912	376 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	VPS9	P54787	451 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	FAR8	Q05040	523 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	PGC1	Q08959	321 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	YPL225W	Q08971	146 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	TIP41	Q12199	356 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	RLM1	Q12224	676 aa		3.56	□□□□□ -1.84
FDH2	YPL275W	SEN1	Q00416	2231 aa	Known RBP	3.56	□□□□□ -1.84
FDH2	YPL275W	GCD2	P12754	651 aa	Predicted RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	PUT4	P15380	627 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	PRP16	P15938	1071 aa	Predicted RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	EST1	P17214	699 aa	Predicted RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	RDS1	P25611	832 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	ZIP1	P31111	875 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	CSE2	P33308	149 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	TCD2	P36101	447 aa	Known RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	FES1	P38260	290 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	YHL026C	P38740	315 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	STN1	P38960	494 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	YER137C	P40083	148 aa	Known RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	ALG5	P40350	334 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	AGE2	P40529	298 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	YIL001W	P40560	513 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	INA22	P40576	216 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	ARF3	P40994	183 aa	RIP-Chip data	3.55	□□□□□ -1.84	not detected
FDH2	YPL275W	ALK1	P43633	760 aa	Known RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
FDH2	YPL275W	YJL055W	P47044	245 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	RTT101	P47050	842 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	COX16	P47081	118 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	YDL186W	P48568	277 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	COS10	P52924	374 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	YGR066C	P53242	292 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	ZPR1	P53303	486 aa	Known RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	ARE2	P53629	642 aa	Known RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	ALF1	P53904	254 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	SLT2	Q00772	484 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	FIN1	Q03898	291 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	GLO2	Q05584	274 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	VAC14	Q06708	880 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	YDL057W	Q07379	328 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	MSH5	Q12175	901 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	HTZ1	Q12692	134 aa	Known RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	ADF1	Q2V2Q1	113 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	CMC2	Q3E7A4	109 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	HSH49	Q99181	213 aa	Predicted RBP	3.55	□□□□□ -1.84
FDH2	YPL275W	FMP27	Q06179	2628 aa		3.55	□□□□□ -1.84
FDH2	YPL275W	CBS1	P14066	229 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	SEC63	P14906	663 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	DBF2	P22204	572 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	RPC19	P28000	142 aa	Known RBP	3.54	□□□□□ -1.84
FDH2	YPL275W	CRM1	P30822	1084 aa	Known RBP	3.54	□□□□□ -1.84
FDH2	YPL275W	ATS1	P31386	333 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	ASF2	P32448	525 aa	Predicted RBP	3.54	□□□□□ -1.84
FDH2	YPL275W	NDC1	P32500	655 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	RIB7	P33312	244 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	WBP1	P33767	430 aa	Known RBP	3.54	□□□□□ -1.84
FDH2	YPL275W	SIP3	P38717	1229 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	MDM31	P38880	579 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	KRE9	P39005	276 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	GIM4	P40005	111 aa	Known RBP	3.54	□□□□□ -1.84
FDH2	YPL275W	YRB2	P40517	327 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	RPR2	P40571	144 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	MET28	P40573	187 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	UFE1	P41834	346 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	HAM1	P47119	197 aa	Known RBP	3.54	□□□□□ -1.84
FDH2	YPL275W	YML6	P51998	286 aa		3.54	□□□□□ -1.84
FDH2	YPL275W	CAF130	P53280	1122 aa	Predicted RBP	3.54	□□□□□ -1.84
FDH2	YPL275W	PGA2	P53903	129 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms